Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.95■□□□□ 0.94
CENPVL3A0A0U1RRI6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPVL3A0A0U1RRI6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPVL3A0A0U1RRI6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPVL3A0A0U1RRI6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.94■□□□□ 0.94
CENPVL3A0A0U1RRI6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPVL3A0A0U1RRI6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPVL3A0A0U1RRI6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CENPVL3A0A0U1RRI6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.93■□□□□ 0.94
CENPVL3A0A0U1RRI6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPVL3A0A0U1RRI6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.93■□□□□ 0.94
CENPVL3A0A0U1RRI6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CENPVL3A0A0U1RRI6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPVL3A0A0U1RRI6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.9■□□□□ 0.94
CENPVL3A0A0U1RRI6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CENPVL3A0A0U1RRI6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CENPVL3A0A0U1RRI6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CENPVL3A0A0U1RRI6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CENPVL3A0A0U1RRI6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPVL3A0A0U1RRI6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPVL3A0A0U1RRI6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.87■□□□□ 0.93
CENPVL3A0A0U1RRI6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPVL3A0A0U1RRI6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.86■□□□□ 0.93
CENPVL3A0A0U1RRI6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPVL3A0A0U1RRI6 AC110285.7-201ENST00000624417 1536 ntBASIC20.84■□□□□ 0.93
CENPVL3A0A0U1RRI6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPVL3A0A0U1RRI6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CENPVL3A0A0U1RRI6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CENPVL3A0A0U1RRI6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPVL3A0A0U1RRI6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPVL3A0A0U1RRI6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPVL3A0A0U1RRI6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CENPVL3A0A0U1RRI6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPVL3A0A0U1RRI6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.82■□□□□ 0.92
CENPVL3A0A0U1RRI6 AC008813.1-201ENST00000536597 885 ntBASIC20.82■□□□□ 0.92
CENPVL3A0A0U1RRI6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CENPVL3A0A0U1RRI6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.81■□□□□ 0.92
CENPVL3A0A0U1RRI6 AP004833.2-201ENST00000532228 1454 ntBASIC20.81■□□□□ 0.92
CENPVL3A0A0U1RRI6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPVL3A0A0U1RRI6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPVL3A0A0U1RRI6 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.81■□□□□ 0.92
CENPVL3A0A0U1RRI6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPVL3A0A0U1RRI6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 HSD17B1P1-201ENST00000590052 955 ntBASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPVL3A0A0U1RRI6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPVL3A0A0U1RRI6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CENPVL3A0A0U1RRI6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.77■□□□□ 0.92
CENPVL3A0A0U1RRI6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPVL3A0A0U1RRI6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CENPVL3A0A0U1RRI6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPVL3A0A0U1RRI6 ABCB10P1-201ENST00000614297 2181 ntBASIC20.76■□□□□ 0.91
CENPVL3A0A0U1RRI6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPVL3A0A0U1RRI6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CENPVL3A0A0U1RRI6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.75■□□□□ 0.91
CENPVL3A0A0U1RRI6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPVL3A0A0U1RRI6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CENPVL3A0A0U1RRI6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CENPVL3A0A0U1RRI6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.73■□□□□ 0.91
CENPVL3A0A0U1RRI6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.73■□□□□ 0.91
CENPVL3A0A0U1RRI6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPVL3A0A0U1RRI6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPVL3A0A0U1RRI6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms