Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 AC087741.3-201ENST00000624270 1347 ntBASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 MIR6090-201ENST00000622481 60 ntBASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.27■□□□□ 0.52
TRGV4A0A0C4DH28 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TRGV4A0A0C4DH28 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRGV4A0A0C4DH28 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV4A0A0C4DH28 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV4A0A0C4DH28 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV4A0A0C4DH28 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV4A0A0C4DH28 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.22■□□□□ 0.51
TRGV4A0A0C4DH28 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV4A0A0C4DH28 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV4A0A0C4DH28 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV4A0A0C4DH28 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.21■□□□□ 0.5
TRGV4A0A0C4DH28 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.2■□□□□ 0.5
TRGV4A0A0C4DH28 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.2■□□□□ 0.5
TRGV4A0A0C4DH28 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.19■□□□□ 0.5
TRGV4A0A0C4DH28 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 AC142086.6-201ENST00000621154 1765 ntBASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV4A0A0C4DH28 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV4A0A0C4DH28 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV4A0A0C4DH28 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV4A0A0C4DH28 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV4A0A0C4DH28 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV4A0A0C4DH28 DRD5P2-201ENST00000421395 2012 ntBASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRGV4A0A0C4DH28 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV4A0A0C4DH28 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRGV4A0A0C4DH28 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRGV4A0A0C4DH28 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV4A0A0C4DH28 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRGV4A0A0C4DH28 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV4A0A0C4DH28 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV4A0A0C4DH28 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRGV4A0A0C4DH28 RPS2P35-201ENST00000443417 897 ntBASIC18.13■□□□□ 0.49
TRGV4A0A0C4DH28 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRGV4A0A0C4DH28 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.13■□□□□ 0.49
TRGV4A0A0C4DH28 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 LINC00273-201ENST00000539813 1452 ntBASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 AC100797.4-201ENST00000631653 1827 ntBASIC18.12■□□□□ 0.49
TRGV4A0A0C4DH28 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 DUX4L29-201ENST00000425409 679 ntBASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms