Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV4A0A0B4J268 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV4A0A0B4J268 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV4A0A0B4J268 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV4A0A0B4J268 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV4A0A0B4J268 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV4A0A0B4J268 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV4A0A0B4J268 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV4A0A0B4J268 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV4A0A0B4J268 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV4A0A0B4J268 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV4A0A0B4J268 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TRAV4A0A0B4J268 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV4A0A0B4J268 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV4A0A0B4J268 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV4A0A0B4J268 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV4A0A0B4J268 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV4A0A0B4J268 MIR6090-201ENST00000622481 60 ntBASIC18.28■□□□□ 0.52
TRAV4A0A0B4J268 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV4A0A0B4J268 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV4A0A0B4J268 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV4A0A0B4J268 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV4A0A0B4J268 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV4A0A0B4J268 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV4A0A0B4J268 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TRAV4A0A0B4J268 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV4A0A0B4J268 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV4A0A0B4J268 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV4A0A0B4J268 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV4A0A0B4J268 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV4A0A0B4J268 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV4A0A0B4J268 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV4A0A0B4J268 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV4A0A0B4J268 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV4A0A0B4J268 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV4A0A0B4J268 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV4A0A0B4J268 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 AL162393.1-201ENST00000437852 946 ntBASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 AC087741.3-201ENST00000624270 1347 ntBASIC18.23■□□□□ 0.51
TRAV4A0A0B4J268 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 AC100797.4-201ENST00000631653 1827 ntBASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 AC044849.2-201ENST00000606596 710 ntBASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV4A0A0B4J268 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 LINC00273-201ENST00000539813 1452 ntBASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 AC135983.2-203ENST00000454486 1613 ntBASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV4A0A0B4J268 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV4A0A0B4J268 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV4A0A0B4J268 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV4A0A0B4J268 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV4A0A0B4J268 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV4A0A0B4J268 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms