Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
TRAV30A0A087WSZ9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV30A0A087WSZ9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV30A0A087WSZ9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV30A0A087WSZ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV30A0A087WSZ9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV30A0A087WSZ9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV30A0A087WSZ9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV30A0A087WSZ9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRAV30A0A087WSZ9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV30A0A087WSZ9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV30A0A087WSZ9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRAV30A0A087WSZ9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV30A0A087WSZ9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV30A0A087WSZ9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV30A0A087WSZ9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 AC108673.1-201ENST00000510422 1159 ntBASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV30A0A087WSZ9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 SUZ12P1-203ENST00000578195 985 ntBASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV30A0A087WSZ9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV30A0A087WSZ9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV30A0A087WSZ9 BX255925.1-201ENST00000566954 1854 ntBASIC19.9■□□□□ 0.78
TRAV30A0A087WSZ9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV30A0A087WSZ9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV30A0A087WSZ9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV30A0A087WSZ9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV30A0A087WSZ9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV30A0A087WSZ9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV30A0A087WSZ9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRAV30A0A087WSZ9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV30A0A087WSZ9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV30A0A087WSZ9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV30A0A087WSZ9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV30A0A087WSZ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
TRAV30A0A087WSZ9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV30A0A087WSZ9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV30A0A087WSZ9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 MIR3665-201ENST00000578708 105 ntBASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 AC100797.4-201ENST00000631653 1827 ntBASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV30A0A087WSZ9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV30A0A087WSZ9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV30A0A087WSZ9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV30A0A087WSZ9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV30A0A087WSZ9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAV30A0A087WSZ9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV30A0A087WSZ9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRAV30A0A087WSZ9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.83■□□□□ 0.76
TRAV30A0A087WSZ9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV30A0A087WSZ9 AP002414.2-202ENST00000590929 1450 ntBASIC19.82■□□□□ 0.76
TRAV30A0A087WSZ9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV30A0A087WSZ9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV30A0A087WSZ9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV30A0A087WSZ9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV30A0A087WSZ9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV30A0A087WSZ9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV30A0A087WSZ9 AP006261.1-201ENST00000584783 668 ntBASIC19.8■□□□□ 0.76
TRAV30A0A087WSZ9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms