Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR100HG-212ENST00000531381 3370 ntTSL 2 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 GALC-203ENST00000393569 2547 ntTSL 2 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 EFCAB12-201ENST00000326085 2153 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01238-203ENST00000429456 2170 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 EFCAB12-204ENST00000505956 2154 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CAMK2G-207ENST00000423381 3824 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC6A12-203ENST00000424061 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 BCAR3-204ENST00000370247 2827 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC018880.1-201ENST00000418898 1319 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CLIP1-213ENST00000540338 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF587-202ENST00000419854 5731 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC023824.7-201ENST00000623041 5731 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ADAM20P3-201ENST00000508710 2106 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MAPK10-295ENST00000641274 2259 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MAPK10-316ENST00000641430 2285 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LMOD1-202ENST00000616739 3058 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MAPK10-279ENST00000641157 2449 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01977-201ENST00000576963 1788 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RGS6-219ENST00000622468 5453 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 OR5BA1P-202ENST00000641215 5464 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC012640.4-201ENST00000606194 2550 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 AC006206.1-201ENST00000544842 3387 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 LRRC46-201ENST00000269025 1922 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 H3F3AP6-201ENST00000230495 411 ntBASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CSPG4P1Y-201ENST00000306641 795 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP4-4Q9BYR3 CSPG4P2Y-201ENST00000306853 795 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms