RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
TCN2-201ENST00000215838 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
TCN2-201ENST00000215838 HRCP23327 699 aa19.34■□□□□ 0.69
TCN2-201ENST00000215838 PPARGC1BQ86YN6 1023 aaKnown RBP19.08■□□□□ 0.64
TCN2-201ENST00000215838 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
TCN2-201ENST00000215838 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
TCN2-201ENST00000215838 ABCC9O60706 1549 aa18.7■□□□□ 0.58
TCN2-201ENST00000215838 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
TCN2-201ENST00000215838 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
TCN2-201ENST00000215838 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
TCN2-201ENST00000215838 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
TCN2-201ENST00000215838 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
TCN2-201ENST00000215838 NACADO15069 1562 aa18.41■□□□□ 0.54
TCN2-201ENST00000215838 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
TCN2-201ENST00000215838 MYT1Q01538 1121 aa18.38■□□□□ 0.53
TCN2-201ENST00000215838 RB1CC1Q8TDY2 1594 aa18.31■□□□□ 0.52
TCN2-201ENST00000215838 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
TCN2-201ENST00000215838 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
TCN2-201ENST00000215838 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.47
TCN2-201ENST00000215838 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
TCN2-201ENST00000215838 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
TCN2-201ENST00000215838 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
TCN2-201ENST00000215838 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
TCN2-201ENST00000215838 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
TCN2-201ENST00000215838 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
TCN2-201ENST00000215838 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
TCN2-201ENST00000215838 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
TCN2-201ENST00000215838 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
TCN2-201ENST00000215838 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
TCN2-201ENST00000215838 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
TCN2-201ENST00000215838 BCL11AQ9H165 835 aa17.39■□□□□ 0.37
TCN2-201ENST00000215838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
TCN2-201ENST00000215838 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
TCN2-201ENST00000215838 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
TCN2-201ENST00000215838 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
TCN2-201ENST00000215838 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
TCN2-201ENST00000215838 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
TCN2-201ENST00000215838 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
TCN2-201ENST00000215838 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
TCN2-201ENST00000215838 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
TCN2-201ENST00000215838 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
TCN2-201ENST00000215838 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
TCN2-201ENST00000215838 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
TCN2-201ENST00000215838 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
TCN2-201ENST00000215838 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
TCN2-201ENST00000215838 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
TCN2-201ENST00000215838 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
TCN2-201ENST00000215838 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
TCN2-201ENST00000215838 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
TCN2-201ENST00000215838 MIER1Q8N108 512 aa17■□□□□ 0.31
TCN2-201ENST00000215838 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
TCN2-201ENST00000215838 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
TCN2-201ENST00000215838 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
TCN2-201ENST00000215838 WIZO95785 1651 aa16.94■□□□□ 0.3
TCN2-201ENST00000215838 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
TCN2-201ENST00000215838 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
TCN2-201ENST00000215838 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
TCN2-201ENST00000215838 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
TCN2-201ENST00000215838 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
TCN2-201ENST00000215838 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
TCN2-201ENST00000215838 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
TCN2-201ENST00000215838 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
TCN2-201ENST00000215838 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
TCN2-201ENST00000215838 BCANQ96GW7 911 aa16.55■□□□□ 0.24
TCN2-201ENST00000215838 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
TCN2-201ENST00000215838 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
TCN2-201ENST00000215838 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
TCN2-201ENST00000215838 MSH5O43196 834 aa16.43■□□□□ 0.22
TCN2-201ENST00000215838 CFTRP13569 1480 aa16.42■□□□□ 0.22
TCN2-201ENST00000215838 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
TCN2-201ENST00000215838 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
TCN2-201ENST00000215838 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
TCN2-201ENST00000215838 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
TCN2-201ENST00000215838 FKBP8Q14318 412 aa16.37■□□□□ 0.21
TCN2-201ENST00000215838 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
TCN2-201ENST00000215838 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.2
TCN2-201ENST00000215838 ITGAEP38570 1179 aa16.3■□□□□ 0.2
TCN2-201ENST00000215838 NESP48681 1621 aa16.29■□□□□ 0.2
TCN2-201ENST00000215838 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
TCN2-201ENST00000215838 APLP2Q06481 763 aa16.27■□□□□ 0.2
TCN2-201ENST00000215838 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
TCN2-201ENST00000215838 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
TCN2-201ENST00000215838 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
TCN2-201ENST00000215838 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
TCN2-201ENST00000215838 DEKP35659 375 aaKnown RBP16.19■□□□□ 0.18
TCN2-201ENST00000215838 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
TCN2-201ENST00000215838 SALL2Q9Y467 1007 aaPredicted RBP16.12■□□□□ 0.17
TCN2-201ENST00000215838 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
TCN2-201ENST00000215838 FANCIQ9NVI1 1328 aa16.11■□□□□ 0.17
TCN2-201ENST00000215838 NEFLP07196 543 aa16.11■□□□□ 0.17
TCN2-201ENST00000215838 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
TCN2-201ENST00000215838 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
TCN2-201ENST00000215838 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
TCN2-201ENST00000215838 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
TCN2-201ENST00000215838 SOGA1O94964 1423 aa16.09■□□□□ 0.17
TCN2-201ENST00000215838 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.16
TCN2-201ENST00000215838 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
TCN2-201ENST00000215838 WDR62O43379 1518 aa16.07■□□□□ 0.16
TCN2-201ENST00000215838 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
TCN2-201ENST00000215838 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms