RNA–Protein interactions for RNA: ENST00000370247.7

BCAR3-204, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene BCAR3, Length 2,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-204ENST00000370247 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
BCAR3-204ENST00000370247 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
BCAR3-204ENST00000370247 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
BCAR3-204ENST00000370247 SHROOM4Q9ULL8 1493 aa19.74■□□□□ 0.75
BCAR3-204ENST00000370247 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
BCAR3-204ENST00000370247 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
BCAR3-204ENST00000370247 SUPT5HO00267 1087 aaKnown RBP19.17■□□□□ 0.66
BCAR3-204ENST00000370247 ABCC9O60706 1549 aa19.01■□□□□ 0.63
BCAR3-204ENST00000370247 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
BCAR3-204ENST00000370247 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
BCAR3-204ENST00000370247 NACADO15069 1562 aa18.69■□□□□ 0.58
BCAR3-204ENST00000370247 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
BCAR3-204ENST00000370247 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
BCAR3-204ENST00000370247 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
BCAR3-204ENST00000370247 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
BCAR3-204ENST00000370247 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
BCAR3-204ENST00000370247 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
BCAR3-204ENST00000370247 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
BCAR3-204ENST00000370247 WIZO95785 1651 aa18.08■□□□□ 0.49
BCAR3-204ENST00000370247 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
BCAR3-204ENST00000370247 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
BCAR3-204ENST00000370247 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
BCAR3-204ENST00000370247 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
BCAR3-204ENST00000370247 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
BCAR3-204ENST00000370247 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
BCAR3-204ENST00000370247 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
BCAR3-204ENST00000370247 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
BCAR3-204ENST00000370247 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
BCAR3-204ENST00000370247 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
BCAR3-204ENST00000370247 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
BCAR3-204ENST00000370247 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.4
BCAR3-204ENST00000370247 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
BCAR3-204ENST00000370247 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
BCAR3-204ENST00000370247 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
BCAR3-204ENST00000370247 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
BCAR3-204ENST00000370247 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
BCAR3-204ENST00000370247 SOGA1O94964 1423 aa17.3■□□□□ 0.36
BCAR3-204ENST00000370247 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
BCAR3-204ENST00000370247 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
BCAR3-204ENST00000370247 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
BCAR3-204ENST00000370247 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
BCAR3-204ENST00000370247 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
BCAR3-204ENST00000370247 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
BCAR3-204ENST00000370247 EEA1Q15075 1411 aa17.14■□□□□ 0.33
BCAR3-204ENST00000370247 HRCP23327 699 aa17.14■□□□□ 0.33
BCAR3-204ENST00000370247 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
BCAR3-204ENST00000370247 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
BCAR3-204ENST00000370247 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
BCAR3-204ENST00000370247 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
BCAR3-204ENST00000370247 CFTRP13569 1480 aa17.04■□□□□ 0.32
BCAR3-204ENST00000370247 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
BCAR3-204ENST00000370247 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
BCAR3-204ENST00000370247 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
BCAR3-204ENST00000370247 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
BCAR3-204ENST00000370247 CUX1P39880 1505 aa16.97■□□□□ 0.31
BCAR3-204ENST00000370247 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
BCAR3-204ENST00000370247 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
BCAR3-204ENST00000370247 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
BCAR3-204ENST00000370247 KIF21BO75037 1637 aa16.92■□□□□ 0.3
BCAR3-204ENST00000370247 RANGAP1P46060 587 aaPredicted RBP16.9■□□□□ 0.3
BCAR3-204ENST00000370247 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
BCAR3-204ENST00000370247 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
BCAR3-204ENST00000370247 CLIP1P30622 1438 aa16.82■□□□□ 0.28
BCAR3-204ENST00000370247 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
BCAR3-204ENST00000370247 NESP48681 1621 aa16.8■□□□□ 0.28
BCAR3-204ENST00000370247 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
BCAR3-204ENST00000370247 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
BCAR3-204ENST00000370247 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
BCAR3-204ENST00000370247 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
BCAR3-204ENST00000370247 CUX2O14529 1486 aa16.75■□□□□ 0.27
BCAR3-204ENST00000370247 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
BCAR3-204ENST00000370247 MYT1Q01538 1121 aa16.74■□□□□ 0.27
BCAR3-204ENST00000370247 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
BCAR3-204ENST00000370247 VPS8Q8N3P4 1428 aa16.68■□□□□ 0.26
BCAR3-204ENST00000370247 APLP2Q06481 763 aa16.65■□□□□ 0.26
BCAR3-204ENST00000370247 IGF1RP08069 1367 aa16.64■□□□□ 0.25
BCAR3-204ENST00000370247 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
BCAR3-204ENST00000370247 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
BCAR3-204ENST00000370247 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
BCAR3-204ENST00000370247 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
BCAR3-204ENST00000370247 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
BCAR3-204ENST00000370247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
BCAR3-204ENST00000370247 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
BCAR3-204ENST00000370247 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
BCAR3-204ENST00000370247 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
BCAR3-204ENST00000370247 ARAP1Q96P48 1450 aa16.57■□□□□ 0.24
BCAR3-204ENST00000370247 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
BCAR3-204ENST00000370247 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
BCAR3-204ENST00000370247 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
BCAR3-204ENST00000370247 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
BCAR3-204ENST00000370247 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
BCAR3-204ENST00000370247 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
BCAR3-204ENST00000370247 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
BCAR3-204ENST00000370247 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
BCAR3-204ENST00000370247 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
BCAR3-204ENST00000370247 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
BCAR3-204ENST00000370247 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
BCAR3-204ENST00000370247 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
BCAR3-204ENST00000370247 CUL7Q14999 1698 aa16.37■□□□□ 0.21
BCAR3-204ENST00000370247 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms