RNA–Protein interactions for RNA: ENST00000379020.8

SEC61A2-204, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5 BASIC

Gene SEC61A2, Length 2,252 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-204ENST00000379020 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.19
SEC61A2-204ENST00000379020 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
SEC61A2-204ENST00000379020 ABCC9O60706 1549 aa19.29■□□□□ 0.68
SEC61A2-204ENST00000379020 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
SEC61A2-204ENST00000379020 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
SEC61A2-204ENST00000379020 NACADO15069 1562 aa18.66■□□□□ 0.58
SEC61A2-204ENST00000379020 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
SEC61A2-204ENST00000379020 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
SEC61A2-204ENST00000379020 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
SEC61A2-204ENST00000379020 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.51
SEC61A2-204ENST00000379020 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
SEC61A2-204ENST00000379020 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
SEC61A2-204ENST00000379020 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
SEC61A2-204ENST00000379020 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.47
SEC61A2-204ENST00000379020 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
SEC61A2-204ENST00000379020 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
SEC61A2-204ENST00000379020 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
SEC61A2-204ENST00000379020 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
SEC61A2-204ENST00000379020 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
SEC61A2-204ENST00000379020 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
SEC61A2-204ENST00000379020 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
SEC61A2-204ENST00000379020 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
SEC61A2-204ENST00000379020 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
SEC61A2-204ENST00000379020 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
SEC61A2-204ENST00000379020 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
SEC61A2-204ENST00000379020 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
SEC61A2-204ENST00000379020 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SEC61A2-204ENST00000379020 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
SEC61A2-204ENST00000379020 WIZO95785 1651 aa17.16■□□□□ 0.34
SEC61A2-204ENST00000379020 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
SEC61A2-204ENST00000379020 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
SEC61A2-204ENST00000379020 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
SEC61A2-204ENST00000379020 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
SEC61A2-204ENST00000379020 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
SEC61A2-204ENST00000379020 NESP48681 1621 aa16.74■□□□□ 0.27
SEC61A2-204ENST00000379020 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
SEC61A2-204ENST00000379020 CFTRP13569 1480 aa16.65■□□□□ 0.26
SEC61A2-204ENST00000379020 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
SEC61A2-204ENST00000379020 PRDM2Q13029 1718 aa16.63■□□□□ 0.25
SEC61A2-204ENST00000379020 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
SEC61A2-204ENST00000379020 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
SEC61A2-204ENST00000379020 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
SEC61A2-204ENST00000379020 CUX2O14529 1486 aa16.52■□□□□ 0.24
SEC61A2-204ENST00000379020 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
SEC61A2-204ENST00000379020 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
SEC61A2-204ENST00000379020 MRC2Q9UBG0 1479 aa16.44■□□□□ 0.22
SEC61A2-204ENST00000379020 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
SEC61A2-204ENST00000379020 WDR62O43379 1518 aa16.38■□□□□ 0.21
SEC61A2-204ENST00000379020 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
SEC61A2-204ENST00000379020 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
SEC61A2-204ENST00000379020 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
SEC61A2-204ENST00000379020 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
SEC61A2-204ENST00000379020 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
SEC61A2-204ENST00000379020 CUX1P39880 1505 aa16.23■□□□□ 0.19
SEC61A2-204ENST00000379020 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
SEC61A2-204ENST00000379020 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
SEC61A2-204ENST00000379020 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
SEC61A2-204ENST00000379020 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
SEC61A2-204ENST00000379020 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SEC61A2-204ENST00000379020 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
SEC61A2-204ENST00000379020 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
SEC61A2-204ENST00000379020 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
SEC61A2-204ENST00000379020 SOGA1O94964 1423 aa16.08■□□□□ 0.16
SEC61A2-204ENST00000379020 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
SEC61A2-204ENST00000379020 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
SEC61A2-204ENST00000379020 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
SEC61A2-204ENST00000379020 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
SEC61A2-204ENST00000379020 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
SEC61A2-204ENST00000379020 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
SEC61A2-204ENST00000379020 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEC61A2-204ENST00000379020 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
SEC61A2-204ENST00000379020 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
SEC61A2-204ENST00000379020 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
SEC61A2-204ENST00000379020 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
SEC61A2-204ENST00000379020 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
SEC61A2-204ENST00000379020 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
SEC61A2-204ENST00000379020 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
SEC61A2-204ENST00000379020 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
SEC61A2-204ENST00000379020 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
SEC61A2-204ENST00000379020 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
SEC61A2-204ENST00000379020 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
SEC61A2-204ENST00000379020 CHD1O14646 1710 aa15.82■□□□□ 0.12
SEC61A2-204ENST00000379020 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
SEC61A2-204ENST00000379020 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
SEC61A2-204ENST00000379020 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
SEC61A2-204ENST00000379020 SYNJ2O15056 1496 aa15.77■□□□□ 0.11
SEC61A2-204ENST00000379020 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SEC61A2-204ENST00000379020 CUL7Q14999 1698 aa15.76■□□□□ 0.11
SEC61A2-204ENST00000379020 EEA1Q15075 1411 aa15.75■□□□□ 0.11
SEC61A2-204ENST00000379020 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
SEC61A2-204ENST00000379020 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
SEC61A2-204ENST00000379020 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
SEC61A2-204ENST00000379020 IGF1RP08069 1367 aa15.71■□□□□ 0.11
SEC61A2-204ENST00000379020 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
SEC61A2-204ENST00000379020 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
SEC61A2-204ENST00000379020 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
SEC61A2-204ENST00000379020 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
SEC61A2-204ENST00000379020 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
SEC61A2-204ENST00000379020 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
SEC61A2-204ENST00000379020 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms