RNA–Protein interactions for RNA: ENST00000617740.4

RUNX1T1-252, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-252ENST00000617740 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
RUNX1T1-252ENST00000617740 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
RUNX1T1-252ENST00000617740 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
RUNX1T1-252ENST00000617740 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
RUNX1T1-252ENST00000617740 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
RUNX1T1-252ENST00000617740 MYT1Q01538 1121 aa14.8□□□□□ -0.04
RUNX1T1-252ENST00000617740 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
RUNX1T1-252ENST00000617740 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
RUNX1T1-252ENST00000617740 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
RUNX1T1-252ENST00000617740 CCER1Q8TC90 406 aaPredicted RBP14.57□□□□□ -0.08
RUNX1T1-252ENST00000617740 APLP2Q06481 763 aa14.51□□□□□ -0.09
RUNX1T1-252ENST00000617740 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
RUNX1T1-252ENST00000617740 ZEB1P37275 1124 aaPredicted RBP14.5□□□□□ -0.09
RUNX1T1-252ENST00000617740 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
RUNX1T1-252ENST00000617740 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
RUNX1T1-252ENST00000617740 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
RUNX1T1-252ENST00000617740 NEFLP07196 543 aa14.29□□□□□ -0.12
RUNX1T1-252ENST00000617740 HRCP23327 699 aa14.1□□□□□ -0.15
RUNX1T1-252ENST00000617740 RANGAP1P46060 587 aaPredicted RBP14.08□□□□□ -0.16
RUNX1T1-252ENST00000617740 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
RUNX1T1-252ENST00000617740 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
RUNX1T1-252ENST00000617740 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
RUNX1T1-252ENST00000617740 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
RUNX1T1-252ENST00000617740 ATP1B4Q9UN42 357 aaPredicted RBP13.91□□□□□ -0.18
RUNX1T1-252ENST00000617740 UBTFP17480 764 aaKnown RBP13.87□□□□□ -0.19
RUNX1T1-252ENST00000617740 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.2
RUNX1T1-252ENST00000617740 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.22
RUNX1T1-252ENST00000617740 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
RUNX1T1-252ENST00000617740 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
RUNX1T1-252ENST00000617740 POLR3GLQ9BT43 218 aa13.63□□□□□ -0.23
RUNX1T1-252ENST00000617740 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
RUNX1T1-252ENST00000617740 ITGAEP38570 1179 aa13.59□□□□□ -0.23
RUNX1T1-252ENST00000617740 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
RUNX1T1-252ENST00000617740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
RUNX1T1-252ENST00000617740 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
RUNX1T1-252ENST00000617740 BCANQ96GW7 911 aa13.56□□□□□ -0.24
RUNX1T1-252ENST00000617740 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
RUNX1T1-252ENST00000617740 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
RUNX1T1-252ENST00000617740 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
RUNX1T1-252ENST00000617740 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
RUNX1T1-252ENST00000617740 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
RUNX1T1-252ENST00000617740 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
RUNX1T1-252ENST00000617740 ANP32CO43423 234 aa13.25□□□□□ -0.29
RUNX1T1-252ENST00000617740 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
RUNX1T1-252ENST00000617740 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
RUNX1T1-252ENST00000617740 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
RUNX1T1-252ENST00000617740 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
RUNX1T1-252ENST00000617740 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
RUNX1T1-252ENST00000617740 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
RUNX1T1-252ENST00000617740 FKBP8Q14318 412 aa13.11□□□□□ -0.31
RUNX1T1-252ENST00000617740 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
RUNX1T1-252ENST00000617740 NBR1Q14596 966 aa13.08□□□□□ -0.32
RUNX1T1-252ENST00000617740 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
RUNX1T1-252ENST00000617740 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
RUNX1T1-252ENST00000617740 BCL11AQ9H165 835 aa13.04□□□□□ -0.32
RUNX1T1-252ENST00000617740 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
RUNX1T1-252ENST00000617740 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
RUNX1T1-252ENST00000617740 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
RUNX1T1-252ENST00000617740 ARXQ96QS3 562 aa12.91□□□□□ -0.34
RUNX1T1-252ENST00000617740 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
RUNX1T1-252ENST00000617740 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
RUNX1T1-252ENST00000617740 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
RUNX1T1-252ENST00000617740 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.35
RUNX1T1-252ENST00000617740 CCDC136Q96JN2 1154 aa12.81□□□□□ -0.36
RUNX1T1-252ENST00000617740 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
RUNX1T1-252ENST00000617740 FAM9BQ8IZU0 186 aa12.81□□□□□ -0.36
RUNX1T1-252ENST00000617740 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
RUNX1T1-252ENST00000617740 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
RUNX1T1-252ENST00000617740 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
RUNX1T1-252ENST00000617740 MIER1Q8N108 512 aa12.77□□□□□ -0.37
RUNX1T1-252ENST00000617740 NEFMP07197 916 aa12.74□□□□□ -0.37
RUNX1T1-252ENST00000617740 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
RUNX1T1-252ENST00000617740 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
RUNX1T1-252ENST00000617740 TONSLQ96HA7 1378 aa12.68□□□□□ -0.38
RUNX1T1-252ENST00000617740 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
RUNX1T1-252ENST00000617740 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
RUNX1T1-252ENST00000617740 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
RUNX1T1-252ENST00000617740 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
RUNX1T1-252ENST00000617740 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
RUNX1T1-252ENST00000617740 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
RUNX1T1-252ENST00000617740 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
RUNX1T1-252ENST00000617740 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
RUNX1T1-252ENST00000617740 BECN1Q14457 450 aa12.58□□□□□ -0.4
RUNX1T1-252ENST00000617740 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
RUNX1T1-252ENST00000617740 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
RUNX1T1-252ENST00000617740 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
RUNX1T1-252ENST00000617740 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
RUNX1T1-252ENST00000617740 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
RUNX1T1-252ENST00000617740 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
RUNX1T1-252ENST00000617740 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
RUNX1T1-252ENST00000617740 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
RUNX1T1-252ENST00000617740 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
RUNX1T1-252ENST00000617740 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
RUNX1T1-252ENST00000617740 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-252ENST00000617740 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-252ENST00000617740 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
RUNX1T1-252ENST00000617740 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
RUNX1T1-252ENST00000617740 PTMAP06454 111 aaKnown RBP12.49□□□□□ -0.41
RUNX1T1-252ENST00000617740 GOLGA6L22H0YM25 854 aa12.48□□□□□ -0.41
RUNX1T1-252ENST00000617740 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 643.7 ms