RNA–Protein interactions for RNA: ENST00000616739.1

LMOD1-202, Transcript of leiomodin 1, humanhuman

TSL 5 BASIC

Gene LMOD1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMOD1-202ENST00000616739 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
LMOD1-202ENST00000616739 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
LMOD1-202ENST00000616739 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
LMOD1-202ENST00000616739 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
LMOD1-202ENST00000616739 ABCC9O60706 1549 aa18.42■□□□□ 0.54
LMOD1-202ENST00000616739 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
LMOD1-202ENST00000616739 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
LMOD1-202ENST00000616739 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
LMOD1-202ENST00000616739 NACADO15069 1562 aa17.84■□□□□ 0.45
LMOD1-202ENST00000616739 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
LMOD1-202ENST00000616739 HRCP23327 699 aa17.73■□□□□ 0.43
LMOD1-202ENST00000616739 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
LMOD1-202ENST00000616739 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
LMOD1-202ENST00000616739 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
LMOD1-202ENST00000616739 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
LMOD1-202ENST00000616739 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
LMOD1-202ENST00000616739 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
LMOD1-202ENST00000616739 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.37
LMOD1-202ENST00000616739 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
LMOD1-202ENST00000616739 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
LMOD1-202ENST00000616739 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
LMOD1-202ENST00000616739 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
LMOD1-202ENST00000616739 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
LMOD1-202ENST00000616739 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
LMOD1-202ENST00000616739 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
LMOD1-202ENST00000616739 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
LMOD1-202ENST00000616739 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
LMOD1-202ENST00000616739 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
LMOD1-202ENST00000616739 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
LMOD1-202ENST00000616739 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
LMOD1-202ENST00000616739 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
LMOD1-202ENST00000616739 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
LMOD1-202ENST00000616739 WIZO95785 1651 aa16.65■□□□□ 0.26
LMOD1-202ENST00000616739 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
LMOD1-202ENST00000616739 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
LMOD1-202ENST00000616739 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
LMOD1-202ENST00000616739 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
LMOD1-202ENST00000616739 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
LMOD1-202ENST00000616739 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
LMOD1-202ENST00000616739 NEUROD1Q13562 356 aa16.39■□□□□ 0.22
LMOD1-202ENST00000616739 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
LMOD1-202ENST00000616739 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
LMOD1-202ENST00000616739 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
LMOD1-202ENST00000616739 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
LMOD1-202ENST00000616739 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
LMOD1-202ENST00000616739 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
LMOD1-202ENST00000616739 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
LMOD1-202ENST00000616739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
LMOD1-202ENST00000616739 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
LMOD1-202ENST00000616739 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
LMOD1-202ENST00000616739 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
LMOD1-202ENST00000616739 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
LMOD1-202ENST00000616739 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
LMOD1-202ENST00000616739 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
LMOD1-202ENST00000616739 MYT1Q01538 1121 aa16.12■□□□□ 0.17
LMOD1-202ENST00000616739 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.16
LMOD1-202ENST00000616739 YTHDC1Q96MU7 727 aaKnown RBP16.05■□□□□ 0.16
LMOD1-202ENST00000616739 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
LMOD1-202ENST00000616739 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
LMOD1-202ENST00000616739 SOGA1O94964 1423 aa16.02■□□□□ 0.15
LMOD1-202ENST00000616739 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
LMOD1-202ENST00000616739 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
LMOD1-202ENST00000616739 NESP48681 1621 aa15.92■□□□□ 0.14
LMOD1-202ENST00000616739 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
LMOD1-202ENST00000616739 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
LMOD1-202ENST00000616739 CUX2O14529 1486 aa15.88■□□□□ 0.13
LMOD1-202ENST00000616739 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
LMOD1-202ENST00000616739 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
LMOD1-202ENST00000616739 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
LMOD1-202ENST00000616739 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
LMOD1-202ENST00000616739 CFTRP13569 1480 aa15.81■□□□□ 0.12
LMOD1-202ENST00000616739 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
LMOD1-202ENST00000616739 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
LMOD1-202ENST00000616739 MIER1Q8N108 512 aa15.79■□□□□ 0.12
LMOD1-202ENST00000616739 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
LMOD1-202ENST00000616739 WDR62O43379 1518 aa15.7■□□□□ 0.1
LMOD1-202ENST00000616739 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
LMOD1-202ENST00000616739 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
LMOD1-202ENST00000616739 CUX1P39880 1505 aa15.66■□□□□ 0.1
LMOD1-202ENST00000616739 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
LMOD1-202ENST00000616739 EEA1Q15075 1411 aa15.64■□□□□ 0.09
LMOD1-202ENST00000616739 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
LMOD1-202ENST00000616739 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
LMOD1-202ENST00000616739 APLP2Q06481 763 aa15.6■□□□□ 0.09
LMOD1-202ENST00000616739 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
LMOD1-202ENST00000616739 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
LMOD1-202ENST00000616739 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
LMOD1-202ENST00000616739 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
LMOD1-202ENST00000616739 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.09
LMOD1-202ENST00000616739 TOP2BQ02880 1626 aa15.58■□□□□ 0.08
LMOD1-202ENST00000616739 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
LMOD1-202ENST00000616739 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
LMOD1-202ENST00000616739 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
LMOD1-202ENST00000616739 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
LMOD1-202ENST00000616739 CLIP1P30622 1438 aa15.51■□□□□ 0.07
LMOD1-202ENST00000616739 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
LMOD1-202ENST00000616739 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
LMOD1-202ENST00000616739 IGF1RP08069 1367 aa15.47■□□□□ 0.07
LMOD1-202ENST00000616739 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
LMOD1-202ENST00000616739 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms