RNA–Protein interactions for RNA: ENST00000611727.1

MEP1A-202, Transcript of meprin A subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene MEP1A, Length 2,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEP1A-202ENST00000611727 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
MEP1A-202ENST00000611727 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
MEP1A-202ENST00000611727 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
MEP1A-202ENST00000611727 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
MEP1A-202ENST00000611727 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
MEP1A-202ENST00000611727 ABCC9O60706 1549 aa19.7■□□□□ 0.74
MEP1A-202ENST00000611727 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
MEP1A-202ENST00000611727 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
MEP1A-202ENST00000611727 HRCP23327 699 aa19.33■□□□□ 0.69
MEP1A-202ENST00000611727 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
MEP1A-202ENST00000611727 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
MEP1A-202ENST00000611727 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
MEP1A-202ENST00000611727 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
MEP1A-202ENST00000611727 NACADO15069 1562 aa18.87■□□□□ 0.61
MEP1A-202ENST00000611727 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
MEP1A-202ENST00000611727 PPARGC1BQ86YN6 1023 aaKnown RBP18.8■□□□□ 0.6
MEP1A-202ENST00000611727 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
MEP1A-202ENST00000611727 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
MEP1A-202ENST00000611727 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
MEP1A-202ENST00000611727 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
MEP1A-202ENST00000611727 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
MEP1A-202ENST00000611727 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
MEP1A-202ENST00000611727 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
MEP1A-202ENST00000611727 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
MEP1A-202ENST00000611727 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
MEP1A-202ENST00000611727 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
MEP1A-202ENST00000611727 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.49
MEP1A-202ENST00000611727 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
MEP1A-202ENST00000611727 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
MEP1A-202ENST00000611727 WIZO95785 1651 aa18.02■□□□□ 0.47
MEP1A-202ENST00000611727 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
MEP1A-202ENST00000611727 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
MEP1A-202ENST00000611727 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
MEP1A-202ENST00000611727 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
MEP1A-202ENST00000611727 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.45
MEP1A-202ENST00000611727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
MEP1A-202ENST00000611727 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
MEP1A-202ENST00000611727 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
MEP1A-202ENST00000611727 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
MEP1A-202ENST00000611727 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
MEP1A-202ENST00000611727 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
MEP1A-202ENST00000611727 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
MEP1A-202ENST00000611727 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
MEP1A-202ENST00000611727 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
MEP1A-202ENST00000611727 EEA1Q15075 1411 aa17.7■□□□□ 0.42
MEP1A-202ENST00000611727 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
MEP1A-202ENST00000611727 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
MEP1A-202ENST00000611727 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
MEP1A-202ENST00000611727 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
MEP1A-202ENST00000611727 SOGA1O94964 1423 aa17.65■□□□□ 0.42
MEP1A-202ENST00000611727 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
MEP1A-202ENST00000611727 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
MEP1A-202ENST00000611727 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
MEP1A-202ENST00000611727 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
MEP1A-202ENST00000611727 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
MEP1A-202ENST00000611727 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
MEP1A-202ENST00000611727 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
MEP1A-202ENST00000611727 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
MEP1A-202ENST00000611727 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.38
MEP1A-202ENST00000611727 NCAPD3P42695 1498 aa17.42■□□□□ 0.38
MEP1A-202ENST00000611727 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
MEP1A-202ENST00000611727 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
MEP1A-202ENST00000611727 KIF21BO75037 1637 aa17.36■□□□□ 0.37
MEP1A-202ENST00000611727 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
MEP1A-202ENST00000611727 CLIP1P30622 1438 aa17.36■□□□□ 0.37
MEP1A-202ENST00000611727 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.37
MEP1A-202ENST00000611727 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
MEP1A-202ENST00000611727 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
MEP1A-202ENST00000611727 APLP2Q06481 763 aa17.31■□□□□ 0.36
MEP1A-202ENST00000611727 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
MEP1A-202ENST00000611727 MIER1Q8N108 512 aa17.25■□□□□ 0.35
MEP1A-202ENST00000611727 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
MEP1A-202ENST00000611727 MYT1Q01538 1121 aa17.22■□□□□ 0.35
MEP1A-202ENST00000611727 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
MEP1A-202ENST00000611727 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
MEP1A-202ENST00000611727 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
MEP1A-202ENST00000611727 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
MEP1A-202ENST00000611727 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
MEP1A-202ENST00000611727 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
MEP1A-202ENST00000611727 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
MEP1A-202ENST00000611727 NESP48681 1621 aa17.03■□□□□ 0.32
MEP1A-202ENST00000611727 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
MEP1A-202ENST00000611727 ERCC6Q03468 1493 aa17■□□□□ 0.31
MEP1A-202ENST00000611727 ARAP1Q96P48 1450 aa17■□□□□ 0.31
MEP1A-202ENST00000611727 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
MEP1A-202ENST00000611727 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
MEP1A-202ENST00000611727 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
MEP1A-202ENST00000611727 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
MEP1A-202ENST00000611727 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
MEP1A-202ENST00000611727 CUX2O14529 1486 aa16.91■□□□□ 0.3
MEP1A-202ENST00000611727 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
MEP1A-202ENST00000611727 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
MEP1A-202ENST00000611727 CUX1P39880 1505 aa16.87■□□□□ 0.29
MEP1A-202ENST00000611727 CFTRP13569 1480 aa16.84■□□□□ 0.29
MEP1A-202ENST00000611727 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
MEP1A-202ENST00000611727 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
MEP1A-202ENST00000611727 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
MEP1A-202ENST00000611727 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
MEP1A-202ENST00000611727 ITGAEP38570 1179 aa16.76■□□□□ 0.27
MEP1A-202ENST00000611727 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms