RNA–Protein interactions for RNA: ENST00000445817.1

LINC01641-202, Transcript of long intergenic non-protein coding RNA 1641, humanhuman

TSL 1 (best) BASIC

Gene LINC01641, Length 1,971 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01641-202ENST00000445817 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
LINC01641-202ENST00000445817 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
LINC01641-202ENST00000445817 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
LINC01641-202ENST00000445817 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
LINC01641-202ENST00000445817 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
LINC01641-202ENST00000445817 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
LINC01641-202ENST00000445817 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
LINC01641-202ENST00000445817 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
LINC01641-202ENST00000445817 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
LINC01641-202ENST00000445817 ABCC9O60706 1549 aa17.09■□□□□ 0.33
LINC01641-202ENST00000445817 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
LINC01641-202ENST00000445817 NACADO15069 1562 aa16.9■□□□□ 0.3
LINC01641-202ENST00000445817 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
LINC01641-202ENST00000445817 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
LINC01641-202ENST00000445817 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
LINC01641-202ENST00000445817 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
LINC01641-202ENST00000445817 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
LINC01641-202ENST00000445817 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
LINC01641-202ENST00000445817 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
LINC01641-202ENST00000445817 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
LINC01641-202ENST00000445817 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
LINC01641-202ENST00000445817 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
LINC01641-202ENST00000445817 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
LINC01641-202ENST00000445817 WIZO95785 1651 aa15.99■□□□□ 0.15
LINC01641-202ENST00000445817 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
LINC01641-202ENST00000445817 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
LINC01641-202ENST00000445817 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
LINC01641-202ENST00000445817 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.12
LINC01641-202ENST00000445817 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
LINC01641-202ENST00000445817 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
LINC01641-202ENST00000445817 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
LINC01641-202ENST00000445817 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
LINC01641-202ENST00000445817 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
LINC01641-202ENST00000445817 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
LINC01641-202ENST00000445817 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
LINC01641-202ENST00000445817 HMGXB3Q12766 1538 aa15.55■□□□□ 0.08
LINC01641-202ENST00000445817 KCNA4P22459 653 aa15.44■□□□□ 0.06
LINC01641-202ENST00000445817 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
LINC01641-202ENST00000445817 ABCC8Q09428 1581 aa15.39■□□□□ 0.05
LINC01641-202ENST00000445817 FAM9AQ8IZU1 332 aaPredicted RBP15.36■□□□□ 0.05
LINC01641-202ENST00000445817 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
LINC01641-202ENST00000445817 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
LINC01641-202ENST00000445817 ADRA2BP18089 450 aa15.33■□□□□ 0.04
LINC01641-202ENST00000445817 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
LINC01641-202ENST00000445817 CFTRP13569 1480 aa15.26■□□□□ 0.03
LINC01641-202ENST00000445817 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
LINC01641-202ENST00000445817 EEA1Q15075 1411 aa15.2■□□□□ 0.02
LINC01641-202ENST00000445817 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
LINC01641-202ENST00000445817 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
LINC01641-202ENST00000445817 SOGA1O94964 1423 aa15.14■□□□□ 0.01
LINC01641-202ENST00000445817 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
LINC01641-202ENST00000445817 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
LINC01641-202ENST00000445817 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
LINC01641-202ENST00000445817 CUX1P39880 1505 aa15.06■□□□□ 0
LINC01641-202ENST00000445817 RUSC2Q8N2Y8 1516 aa15.05■□□□□ 0
LINC01641-202ENST00000445817 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
LINC01641-202ENST00000445817 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
LINC01641-202ENST00000445817 NESP48681 1621 aa15□□□□□ -0.01
LINC01641-202ENST00000445817 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
LINC01641-202ENST00000445817 GOLGA3Q08378 1498 aa14.98□□□□□ -0.01
LINC01641-202ENST00000445817 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
LINC01641-202ENST00000445817 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
LINC01641-202ENST00000445817 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
LINC01641-202ENST00000445817 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.01
LINC01641-202ENST00000445817 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
LINC01641-202ENST00000445817 KIF21BO75037 1637 aa14.92□□□□□ -0.02
LINC01641-202ENST00000445817 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
LINC01641-202ENST00000445817 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
LINC01641-202ENST00000445817 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
LINC01641-202ENST00000445817 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
LINC01641-202ENST00000445817 CEP162Q5TB80 1403 aa14.87□□□□□ -0.03
LINC01641-202ENST00000445817 CUX2O14529 1486 aa14.87□□□□□ -0.03
LINC01641-202ENST00000445817 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
LINC01641-202ENST00000445817 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
LINC01641-202ENST00000445817 PCGF6Q9BYE7 350 aa14.82□□□□□ -0.04
LINC01641-202ENST00000445817 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
LINC01641-202ENST00000445817 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
LINC01641-202ENST00000445817 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
LINC01641-202ENST00000445817 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
LINC01641-202ENST00000445817 TRIM26Q12899 539 aaPredicted RBP14.8□□□□□ -0.04
LINC01641-202ENST00000445817 IGF1RP08069 1367 aa14.77□□□□□ -0.04
LINC01641-202ENST00000445817 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
LINC01641-202ENST00000445817 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
LINC01641-202ENST00000445817 CLIP1P30622 1438 aa14.75□□□□□ -0.05
LINC01641-202ENST00000445817 CARMIL1Q5VZK9 1371 aa14.74□□□□□ -0.05
LINC01641-202ENST00000445817 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
LINC01641-202ENST00000445817 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
LINC01641-202ENST00000445817 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
LINC01641-202ENST00000445817 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
LINC01641-202ENST00000445817 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
LINC01641-202ENST00000445817 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
LINC01641-202ENST00000445817 APLP2Q06481 763 aa14.65□□□□□ -0.06
LINC01641-202ENST00000445817 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
LINC01641-202ENST00000445817 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
LINC01641-202ENST00000445817 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
LINC01641-202ENST00000445817 CUL7Q14999 1698 aa14.63□□□□□ -0.07
LINC01641-202ENST00000445817 VPS8Q8N3P4 1428 aa14.61□□□□□ -0.07
LINC01641-202ENST00000445817 WDR62O43379 1518 aa14.61□□□□□ -0.07
LINC01641-202ENST00000445817 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
LINC01641-202ENST00000445817 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms