RNA–Protein interactions for RNA: ENST00000555846.1

SOCS4-204, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-204ENST00000555846 NISCHQ9Y2I1 1504 aa20.56■□□□□ 0.88
SOCS4-204ENST00000555846 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
SOCS4-204ENST00000555846 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
SOCS4-204ENST00000555846 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
SOCS4-204ENST00000555846 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
SOCS4-204ENST00000555846 ABCC9O60706 1549 aa17.21■□□□□ 0.35
SOCS4-204ENST00000555846 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
SOCS4-204ENST00000555846 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
SOCS4-204ENST00000555846 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
SOCS4-204ENST00000555846 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
SOCS4-204ENST00000555846 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
SOCS4-204ENST00000555846 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SOCS4-204ENST00000555846 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
SOCS4-204ENST00000555846 NACADO15069 1562 aa16.4■□□□□ 0.22
SOCS4-204ENST00000555846 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
SOCS4-204ENST00000555846 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
SOCS4-204ENST00000555846 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
SOCS4-204ENST00000555846 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
SOCS4-204ENST00000555846 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.18
SOCS4-204ENST00000555846 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
SOCS4-204ENST00000555846 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
SOCS4-204ENST00000555846 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
SOCS4-204ENST00000555846 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
SOCS4-204ENST00000555846 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
SOCS4-204ENST00000555846 WIZO95785 1651 aa15.87■□□□□ 0.13
SOCS4-204ENST00000555846 TTBK1Q5TCY1 1321 aaPredicted RBP15.86■□□□□ 0.13
SOCS4-204ENST00000555846 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
SOCS4-204ENST00000555846 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
SOCS4-204ENST00000555846 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
SOCS4-204ENST00000555846 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
SOCS4-204ENST00000555846 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
SOCS4-204ENST00000555846 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
SOCS4-204ENST00000555846 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
SOCS4-204ENST00000555846 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
SOCS4-204ENST00000555846 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
SOCS4-204ENST00000555846 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
SOCS4-204ENST00000555846 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
SOCS4-204ENST00000555846 APLP2Q06481 763 aa15.5■□□□□ 0.07
SOCS4-204ENST00000555846 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
SOCS4-204ENST00000555846 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
SOCS4-204ENST00000555846 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
SOCS4-204ENST00000555846 SOGA1O94964 1423 aa15.4■□□□□ 0.06
SOCS4-204ENST00000555846 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
SOCS4-204ENST00000555846 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
SOCS4-204ENST00000555846 HRCP23327 699 aa15.29■□□□□ 0.04
SOCS4-204ENST00000555846 RUSC2Q8N2Y8 1516 aa15.27■□□□□ 0.04
SOCS4-204ENST00000555846 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
SOCS4-204ENST00000555846 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
SOCS4-204ENST00000555846 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
SOCS4-204ENST00000555846 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
SOCS4-204ENST00000555846 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
SOCS4-204ENST00000555846 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
SOCS4-204ENST00000555846 EEA1Q15075 1411 aa15.16■□□□□ 0.02
SOCS4-204ENST00000555846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
SOCS4-204ENST00000555846 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
SOCS4-204ENST00000555846 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
SOCS4-204ENST00000555846 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
SOCS4-204ENST00000555846 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
SOCS4-204ENST00000555846 ITGAEP38570 1179 aa15.12■□□□□ 0.01
SOCS4-204ENST00000555846 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
SOCS4-204ENST00000555846 SYNJ1O43426 1573 aa15.08■□□□□ 0
SOCS4-204ENST00000555846 CLIP1P30622 1438 aa15.08■□□□□ 0
SOCS4-204ENST00000555846 KIF27Q86VH2 1401 aa15.07■□□□□ 0
SOCS4-204ENST00000555846 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
SOCS4-204ENST00000555846 HMGXB3Q12766 1538 aa15.06■□□□□ 0
SOCS4-204ENST00000555846 CUX2O14529 1486 aa15.04■□□□□ -0
SOCS4-204ENST00000555846 FBLN2P98095 1184 aa15.02■□□□□ -0
SOCS4-204ENST00000555846 NESP48681 1621 aa15.02□□□□□ -0.01
SOCS4-204ENST00000555846 ZEB1P37275 1124 aaPredicted RBP15.02□□□□□ -0.01
SOCS4-204ENST00000555846 CFTRP13569 1480 aa15.01□□□□□ -0.01
SOCS4-204ENST00000555846 RAPGEF2Q9Y4G8 1499 aa14.99□□□□□ -0.01
SOCS4-204ENST00000555846 FANCD2Q9BXW9 1451 aa14.99□□□□□ -0.01
SOCS4-204ENST00000555846 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
SOCS4-204ENST00000555846 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
SOCS4-204ENST00000555846 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
SOCS4-204ENST00000555846 CUX1P39880 1505 aa14.92□□□□□ -0.02
SOCS4-204ENST00000555846 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
SOCS4-204ENST00000555846 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
SOCS4-204ENST00000555846 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
SOCS4-204ENST00000555846 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
SOCS4-204ENST00000555846 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
SOCS4-204ENST00000555846 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
SOCS4-204ENST00000555846 IGF1RP08069 1367 aa14.82□□□□□ -0.04
SOCS4-204ENST00000555846 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
SOCS4-204ENST00000555846 VPS8Q8N3P4 1428 aa14.78□□□□□ -0.04
SOCS4-204ENST00000555846 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
SOCS4-204ENST00000555846 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
SOCS4-204ENST00000555846 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.06
SOCS4-204ENST00000555846 KIF21BO75037 1637 aa14.7□□□□□ -0.06
SOCS4-204ENST00000555846 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
SOCS4-204ENST00000555846 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
SOCS4-204ENST00000555846 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.06
SOCS4-204ENST00000555846 FHOD3Q2V2M9 1422 aa14.65□□□□□ -0.06
SOCS4-204ENST00000555846 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
SOCS4-204ENST00000555846 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
SOCS4-204ENST00000555846 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
SOCS4-204ENST00000555846 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
SOCS4-204ENST00000555846 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
SOCS4-204ENST00000555846 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
SOCS4-204ENST00000555846 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms