Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 LSM12P1-201ENST00000411836 588 ntBASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 GPX1P1-201ENST00000388829 606 ntBASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CHMP2BQ9UQN3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP2BQ9UQN3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 AC116351.2-201ENST00000606540 1585 ntBASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP2BQ9UQN3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms