Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEP78395 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
PRAMEP78395 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
PRAMEP78395 TFP1-202ENST00000475455 1573 ntBASIC19.68■□□□□ 0.74
PRAMEP78395 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PRAMEP78395 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.68■□□□□ 0.74
PRAMEP78395 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEP78395 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 AC116562.4-201ENST00000641316 2276 ntBASIC19.68■□□□□ 0.74
PRAMEP78395 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PRAMEP78395 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PRAMEP78395 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PRAMEP78395 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.67■□□□□ 0.74
PRAMEP78395 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 AL121906.2-201ENST00000621597 723 ntBASIC19.67■□□□□ 0.74
PRAMEP78395 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRAMEP78395 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEP78395 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.67■□□□□ 0.74
PRAMEP78395 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEP78395 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PRAMEP78395 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEP78395 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEP78395 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEP78395 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEP78395 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEP78395 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 SOX15-203ENST00000570788 1093 ntBASIC19.66■□□□□ 0.74
PRAMEP78395 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEP78395 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEP78395 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEP78395 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 AL020996.1-203ENST00000536896 2307 ntBASIC19.65■□□□□ 0.74
PRAMEP78395 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEP78395 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEP78395 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEP78395 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEP78395 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.65■□□□□ 0.74
PRAMEP78395 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEP78395 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEP78395 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEP78395 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEP78395 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
PRAMEP78395 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms