Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM6P62312 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LSM6P62312 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM6P62312 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM6P62312 Z82202.1-201ENST00000623446 1880 ntBASIC17.17■□□□□ 0.34
LSM6P62312 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM6P62312 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.16■□□□□ 0.34
LSM6P62312 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LSM6P62312 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM6P62312 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.16■□□□□ 0.34
LSM6P62312 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LSM6P62312 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM6P62312 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LSM6P62312 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LSM6P62312 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LSM6P62312 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM6P62312 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM6P62312 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LSM6P62312 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 POM121L13P-201ENST00000422362 380 ntBASIC17.15■□□□□ 0.34
LSM6P62312 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.15■□□□□ 0.34
LSM6P62312 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM6P62312 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM6P62312 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM6P62312 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LSM6P62312 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM6P62312 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM6P62312 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.14■□□□□ 0.33
LSM6P62312 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM6P62312 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM6P62312 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM6P62312 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM6P62312 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 KRT8P8-201ENST00000434750 1448 ntBASIC17.13■□□□□ 0.33
LSM6P62312 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms