Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
MMP13P45452 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.31■□□□□ 0.84
MMP13P45452 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
MMP13P45452 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP13P45452 AC006557.6-201ENST00000623071 864 ntBASIC20.31■□□□□ 0.84
MMP13P45452 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP13P45452 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MMP13P45452 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MMP13P45452 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MMP13P45452 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP13P45452 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP13P45452 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.3■□□□□ 0.84
MMP13P45452 RNA5SP413-201ENST00000516373 109 ntBASIC20.3■□□□□ 0.84
MMP13P45452 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP13P45452 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP13P45452 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.3■□□□□ 0.84
MMP13P45452 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP13P45452 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP13P45452 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MMP13P45452 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 AC026471.1-201ENST00000564629 3026 ntBASIC20.29■□□□□ 0.84
MMP13P45452 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.29■□□□□ 0.84
MMP13P45452 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MMP13P45452 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP13P45452 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.29■□□□□ 0.84
MMP13P45452 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MMP13P45452 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MMP13P45452 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP13P45452 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MMP13P45452 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP13P45452 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP13P45452 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP13P45452 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.28■□□□□ 0.84
MMP13P45452 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP13P45452 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.28■□□□□ 0.84
MMP13P45452 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
MMP13P45452 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
MMP13P45452 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.28■□□□□ 0.84
MMP13P45452 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP13P45452 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP13P45452 LETM1P2-201ENST00000597330 2178 ntBASIC20.28■□□□□ 0.84
MMP13P45452 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP13P45452 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP13P45452 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP13P45452 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP13P45452 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP13P45452 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP13P45452 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MMP13P45452 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms