Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A3P43003 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.96■□□□□ 0.47
SLC1A3P43003 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC1A3P43003 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A3P43003 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A3P43003 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A3P43003 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC1A3P43003 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC1A3P43003 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A3P43003 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A3P43003 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.96■□□□□ 0.46
SLC1A3P43003 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.96■□□□□ 0.46
SLC1A3P43003 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.96■□□□□ 0.46
SLC1A3P43003 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC1A3P43003 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.95■□□□□ 0.46
SLC1A3P43003 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A3P43003 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
SLC1A3P43003 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A3P43003 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A3P43003 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SLC1A3P43003 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A3P43003 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A3P43003 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A3P43003 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A3P43003 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A3P43003 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC1A3P43003 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.94■□□□□ 0.46
SLC1A3P43003 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC1A3P43003 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC1A3P43003 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A3P43003 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A3P43003 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A3P43003 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A3P43003 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A3P43003 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A3P43003 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A3P43003 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 TFP1-202ENST00000475455 1573 ntBASIC17.93■□□□□ 0.46
SLC1A3P43003 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 RPS2P52-201ENST00000469610 820 ntBASIC17.93■□□□□ 0.46
SLC1A3P43003 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC1A3P43003 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A3P43003 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms