Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT20P35900 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT20P35900 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT20P35900 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
KRT20P35900 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
KRT20P35900 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 AC090340.1-201ENST00000620778 4980 ntBASIC18.54■□□□□ 0.56
KRT20P35900 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT20P35900 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KRT20P35900 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.54■□□□□ 0.56
KRT20P35900 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.54■□□□□ 0.56
KRT20P35900 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
KRT20P35900 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KRT20P35900 KRT8P20-201ENST00000423953 1409 ntBASIC18.54■□□□□ 0.56
KRT20P35900 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KRT20P35900 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT20P35900 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT20P35900 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT20P35900 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT20P35900 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 AC023632.3-201ENST00000521633 145 ntBASIC18.53■□□□□ 0.56
KRT20P35900 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT20P35900 AL031963.3-201ENST00000606441 850 ntBASIC18.53■□□□□ 0.56
KRT20P35900 MYC-209ENST00000641252 345 ntBASIC18.53■□□□□ 0.56
KRT20P35900 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT20P35900 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT20P35900 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT20P35900 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
KRT20P35900 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT20P35900 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KRT20P35900 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT20P35900 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT20P35900 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT20P35900 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT20P35900 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT20P35900 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT20P35900 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
KRT20P35900 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT20P35900 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT20P35900 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
KRT20P35900 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT20P35900 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT20P35900 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
KRT20P35900 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT20P35900 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 KRT8P17-201ENST00000453110 1448 ntBASIC18.51■□□□□ 0.55
KRT20P35900 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT20P35900 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 AC005332.7-201ENST00000614046 2005 ntBASIC18.51■□□□□ 0.55
KRT20P35900 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT20P35900 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT20P35900 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT20P35900 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT20P35900 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT20P35900 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms