Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RETP07949 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RETP07949 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RETP07949 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.73■□□□□ 0.75
RETP07949 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
RETP07949 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.73■□□□□ 0.75
RETP07949 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 MESTP1-201ENST00000404287 994 ntBASIC19.73■□□□□ 0.75
RETP07949 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.73■□□□□ 0.75
RETP07949 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.73■□□□□ 0.75
RETP07949 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.73■□□□□ 0.75
RETP07949 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.73■□□□□ 0.75
RETP07949 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.73■□□□□ 0.75
RETP07949 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RETP07949 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RETP07949 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RETP07949 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
RETP07949 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.72■□□□□ 0.75
RETP07949 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.72■□□□□ 0.75
RETP07949 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.72■□□□□ 0.75
RETP07949 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.72■□□□□ 0.75
RETP07949 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RETP07949 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.72■□□□□ 0.75
RETP07949 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.72■□□□□ 0.75
RETP07949 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
RETP07949 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RETP07949 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.72■□□□□ 0.75
RETP07949 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RETP07949 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RETP07949 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RETP07949 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RETP07949 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.71■□□□□ 0.75
RETP07949 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RETP07949 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.71■□□□□ 0.75
RETP07949 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RETP07949 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.71■□□□□ 0.75
RETP07949 HMGA1P5-201ENST00000412453 271 ntBASIC19.71■□□□□ 0.75
RETP07949 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 AL450487.1-201ENST00000426799 995 ntBASIC19.71■□□□□ 0.75
RETP07949 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.71■□□□□ 0.75
RETP07949 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.71■□□□□ 0.75
RETP07949 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.71■□□□□ 0.75
RETP07949 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RETP07949 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RETP07949 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RETP07949 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.71■□□□□ 0.75
RETP07949 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RETP07949 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.7■□□□□ 0.74
RETP07949 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.7■□□□□ 0.74
RETP07949 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.7■□□□□ 0.74
RETP07949 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.7■□□□□ 0.74
RETP07949 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.7■□□□□ 0.74
RETP07949 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.7■□□□□ 0.74
RETP07949 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
RETP07949 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.7■□□□□ 0.74
RETP07949 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.7■□□□□ 0.74
RETP07949 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.7■□□□□ 0.74
RETP07949 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.7■□□□□ 0.74
RETP07949 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms