Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CTSDP07339 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CTSDP07339 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.22■□□□□ 0.19
CTSDP07339 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.22■□□□□ 0.19
CTSDP07339 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CTSDP07339 ZNRF2P3-201ENST00000424200 374 ntBASIC16.22■□□□□ 0.19
CTSDP07339 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.22■□□□□ 0.19
CTSDP07339 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CTSDP07339 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.22■□□□□ 0.19
CTSDP07339 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CTSDP07339 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSDP07339 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.22■□□□□ 0.19
CTSDP07339 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.22■□□□□ 0.19
CTSDP07339 AC141586.3-201ENST00000562166 1838 ntBASIC16.22■□□□□ 0.19
CTSDP07339 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSDP07339 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSDP07339 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
CTSDP07339 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 AC004854.2-201ENST00000608450 1441 ntBASIC16.21■□□□□ 0.19
CTSDP07339 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTSDP07339 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 AC123595.1-201ENST00000440769 1046 ntBASIC16.21■□□□□ 0.19
CTSDP07339 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSDP07339 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CTSDP07339 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSDP07339 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSDP07339 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CTSDP07339 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.21■□□□□ 0.18
CTSDP07339 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CTSDP07339 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CTSDP07339 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.21■□□□□ 0.18
CTSDP07339 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.21■□□□□ 0.18
CTSDP07339 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.2■□□□□ 0.18
CTSDP07339 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 AC009113.1-201ENST00000570267 2443 ntBASIC16.2■□□□□ 0.18
CTSDP07339 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSDP07339 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSDP07339 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CTSDP07339 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSDP07339 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSDP07339 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.19■□□□□ 0.18
CTSDP07339 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 HCG11-201ENST00000411553 5696 ntBASIC16.19■□□□□ 0.18
CTSDP07339 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSDP07339 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CTSDP07339 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSDP07339 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSDP07339 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CTSDP07339 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 AL162412.1-201ENST00000567129 965 ntBASIC16.19■□□□□ 0.18
CTSDP07339 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms