Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.98■□□□□ 0.15
SCAF4O95104 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.98■□□□□ 0.15
SCAF4O95104 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 AL049812.1-201ENST00000432563 2267 ntBASIC15.97■□□□□ 0.15
SCAF4O95104 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
SCAF4O95104 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.97■□□□□ 0.15
SCAF4O95104 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.97■□□□□ 0.15
SCAF4O95104 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.97■□□□□ 0.15
SCAF4O95104 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
SCAF4O95104 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SCAF4O95104 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCAF4O95104 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.97■□□□□ 0.15
SCAF4O95104 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.96■□□□□ 0.15
SCAF4O95104 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCAF4O95104 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SCAF4O95104 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SCAF4O95104 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCAF4O95104 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.96■□□□□ 0.15
SCAF4O95104 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 KRT19P1-201ENST00000405746 1186 ntBASIC15.96■□□□□ 0.15
SCAF4O95104 AC007322.3-201ENST00000426526 701 ntBASIC15.96■□□□□ 0.15
SCAF4O95104 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.96■□□□□ 0.15
SCAF4O95104 AC092666.2-201ENST00000613287 246 ntBASIC15.96■□□□□ 0.15
SCAF4O95104 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.96■□□□□ 0.15
SCAF4O95104 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCAF4O95104 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCAF4O95104 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SCAF4O95104 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SCAF4O95104 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SCAF4O95104 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.96■□□□□ 0.14
SCAF4O95104 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCAF4O95104 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.95■□□□□ 0.14
SCAF4O95104 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.95■□□□□ 0.14
SCAF4O95104 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.95■□□□□ 0.14
SCAF4O95104 AC010141.2-201ENST00000452426 721 ntBASIC15.95■□□□□ 0.14
SCAF4O95104 KRT18P61-201ENST00000585825 1298 ntBASIC15.95■□□□□ 0.14
SCAF4O95104 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.95■□□□□ 0.14
SCAF4O95104 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SCAF4O95104 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.95■□□□□ 0.14
SCAF4O95104 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCAF4O95104 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SCAF4O95104 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms