Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD4O14678 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ABCD4O14678 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD4O14678 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.27■□□□□ 0.35
ABCD4O14678 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.27■□□□□ 0.35
ABCD4O14678 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD4O14678 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.27■□□□□ 0.35
ABCD4O14678 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 DPP3P2-201ENST00000416030 1696 ntBASIC17.26■□□□□ 0.35
ABCD4O14678 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD4O14678 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ABCD4O14678 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD4O14678 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.26■□□□□ 0.35
ABCD4O14678 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD4O14678 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ABCD4O14678 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD4O14678 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ABCD4O14678 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD4O14678 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCD4O14678 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
ABCD4O14678 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ABCD4O14678 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ABCD4O14678 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.25■□□□□ 0.35
ABCD4O14678 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCD4O14678 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ABCD4O14678 SMG8-203ENST00000578922 2178 ntBASIC17.25■□□□□ 0.35
ABCD4O14678 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ABCD4O14678 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD4O14678 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ABCD4O14678 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
ABCD4O14678 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCD4O14678 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 KRT8P17-201ENST00000453110 1448 ntBASIC17.24■□□□□ 0.35
ABCD4O14678 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ABCD4O14678 SNORA78-201ENST00000459373 127 ntBASIC17.24■□□□□ 0.35
ABCD4O14678 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCD4O14678 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCD4O14678 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCD4O14678 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCD4O14678 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.24■□□□□ 0.35
ABCD4O14678 MIR4497-201ENST00000583208 89 ntBASIC17.24■□□□□ 0.35
ABCD4O14678 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ABCD4O14678 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD4O14678 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCD4O14678 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms