Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 AL137013.1-201ENST00000432946 1228 ntBASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 AC073508.3-201ENST00000619697 1419 ntBASIC17.21■□□□□ 0.34
MBD3L4A6NDZ8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MBD3L4A6NDZ8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD3L4A6NDZ8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.19■□□□□ 0.34
MBD3L4A6NDZ8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MBD3L4A6NDZ8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 KRT18P57-201ENST00000443599 1254 ntBASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.17■□□□□ 0.34
MBD3L4A6NDZ8 ECEL1P2-202ENST00000465689 757 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms