Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 AC139713.2-201ENST00000641328 2723 ntBASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SDF2L1Q9HCN8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 TSPY26P-201ENST00000476365 1326 ntBASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 AC099791.1-201ENST00000416440 715 ntBASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 AC131212.1-201ENST00000613771 668 ntBASIC15.27■□□□□ 0.04
SDF2L1Q9HCN8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SDF2L1Q9HCN8 PRORSD1P-202ENST00000563365 2154 ntBASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 AC009237.14-201ENST00000609975 1594 ntBASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 AP004607.4-201ENST00000530158 1459 ntBASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.26■□□□□ 0.03
SDF2L1Q9HCN8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SDF2L1Q9HCN8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDF2L1Q9HCN8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDF2L1Q9HCN8 AC008406.3-201ENST00000620001 1374 ntBASIC15.24■□□□□ 0.03
SDF2L1Q9HCN8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms