Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 RPS2P55-201ENST00000397318 883 ntBASIC19.7■□□□□ 0.74
CLPBQ9H078 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPBQ9H078 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPBQ9H078 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 AC107956.1-201ENST00000494359 873 ntBASIC19.7■□□□□ 0.74
CLPBQ9H078 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPBQ9H078 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLPBQ9H078 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPBQ9H078 AC124283.5-201ENST00000624661 1809 ntBASIC19.69■□□□□ 0.74
CLPBQ9H078 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPBQ9H078 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.69■□□□□ 0.74
CLPBQ9H078 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.69■□□□□ 0.74
CLPBQ9H078 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPBQ9H078 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPBQ9H078 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 AC012618.2-201ENST00000428058 849 ntBASIC19.69■□□□□ 0.74
CLPBQ9H078 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPBQ9H078 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPBQ9H078 AC233702.5-201ENST00000584107 538 ntBASIC19.69■□□□□ 0.74
CLPBQ9H078 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.69■□□□□ 0.74
CLPBQ9H078 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPBQ9H078 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPBQ9H078 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CLPBQ9H078 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPBQ9H078 TMEM179-206ENST00000616017 1645 ntBASIC19.69■□□□□ 0.74
CLPBQ9H078 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLPBQ9H078 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.68■□□□□ 0.74
CLPBQ9H078 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
CLPBQ9H078 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLPBQ9H078 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.68■□□□□ 0.74
CLPBQ9H078 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLPBQ9H078 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.68■□□□□ 0.74
CLPBQ9H078 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.68■□□□□ 0.74
CLPBQ9H078 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPBQ9H078 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLPBQ9H078 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPBQ9H078 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLPBQ9H078 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CLPBQ9H078 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPBQ9H078 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLPBQ9H078 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLPBQ9H078 PHGDH-210ENST00000641115 1638 ntBASIC19.67■□□□□ 0.74
CLPBQ9H078 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CLPBQ9H078 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLPBQ9H078 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPBQ9H078 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLPBQ9H078 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPBQ9H078 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPBQ9H078 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPBQ9H078 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLPBQ9H078 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPBQ9H078 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
CLPBQ9H078 AFG3L1P-217ENST00000557444 2447 ntBASIC19.66■□□□□ 0.74
CLPBQ9H078 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPBQ9H078 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPBQ9H078 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.66■□□□□ 0.74
CLPBQ9H078 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPBQ9H078 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
CLPBQ9H078 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.66■□□□□ 0.74
CLPBQ9H078 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPBQ9H078 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.66■□□□□ 0.74
CLPBQ9H078 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPBQ9H078 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.66■□□□□ 0.74
CLPBQ9H078 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPBQ9H078 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLPBQ9H078 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPBQ9H078 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLPBQ9H078 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLPBQ9H078 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLPBQ9H078 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLPBQ9H078 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLPBQ9H078 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.65■□□□□ 0.74
CLPBQ9H078 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms