Protein–RNA interactions for Protein: Q96GQ7

DDX27, Probable ATP-dependent RNA helicase DDX27, humanhuman

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX27Q96GQ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX27Q96GQ7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX27Q96GQ7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX27Q96GQ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
DDX27Q96GQ7 AC116351.2-201ENST00000606540 1585 ntBASIC21.31■■□□□ 1
DDX27Q96GQ7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX27Q96GQ7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX27Q96GQ7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
DDX27Q96GQ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
DDX27Q96GQ7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.3■■□□□ 1
DDX27Q96GQ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 AF186192.3-201ENST00000583427 947 ntBASIC21.3■■□□□ 1
DDX27Q96GQ7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
DDX27Q96GQ7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX27Q96GQ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.3■■□□□ 1
DDX27Q96GQ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
DDX27Q96GQ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.3■■□□□ 1
DDX27Q96GQ7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.29■■□□□ 1
DDX27Q96GQ7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.29■■□□□ 1
DDX27Q96GQ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.29■■□□□ 1
DDX27Q96GQ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.29■■□□□ 1
DDX27Q96GQ7 MIR4785-201ENST00000585005 73 ntBASIC21.29■■□□□ 1
DDX27Q96GQ7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX27Q96GQ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.28■■□□□ 1
DDX27Q96GQ7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DDX27Q96GQ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.28■■□□□ 1
DDX27Q96GQ7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.28■■□□□ 1
DDX27Q96GQ7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.28■■□□□ 1
DDX27Q96GQ7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.28■■□□□ 1
DDX27Q96GQ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.28■■□□□ 1
DDX27Q96GQ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.28■■□□□ 1
DDX27Q96GQ7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.28■■□□□ 1
DDX27Q96GQ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.28■■□□□ 1
DDX27Q96GQ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.28■■□□□ 1
DDX27Q96GQ7 AP006587.1-201ENST00000534129 1502 ntBASIC21.28■■□□□ 1
DDX27Q96GQ7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.28■■□□□ 1
DDX27Q96GQ7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX27Q96GQ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.27■■□□□ 1
DDX27Q96GQ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX27Q96GQ7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.27■■□□□ 1
DDX27Q96GQ7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DDX27Q96GQ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.27■■□□□ 1
DDX27Q96GQ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.27■■□□□ 1
DDX27Q96GQ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.27■■□□□ 1
DDX27Q96GQ7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.27■■□□□ 1
DDX27Q96GQ7 SMG8-203ENST00000578922 2178 ntBASIC21.27■■□□□ 1
DDX27Q96GQ7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX27Q96GQ7 TFP1-202ENST00000475455 1573 ntBASIC21.27■□□□□ 0.99
DDX27Q96GQ7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
DDX27Q96GQ7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 AC073195.1-201ENST00000607241 877 ntBASIC21.26■□□□□ 0.99
DDX27Q96GQ7 AL353708.3-201ENST00000610272 989 ntBASIC21.26■□□□□ 0.99
DDX27Q96GQ7 AC073912.3-201ENST00000624414 853 ntBASIC21.26■□□□□ 0.99
DDX27Q96GQ7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
DDX27Q96GQ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms