Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIML2Q8N7C3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AC016769.1-201ENST00000409132 1010 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AC016405.3-201ENST00000607710 860 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 AC007613.1-201ENST00000572811 2597 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIML2Q8N7C3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIML2Q8N7C3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIML2Q8N7C3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms