Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.51■□□□□ 0.23
COL10A1Q03692 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.51■□□□□ 0.23
COL10A1Q03692 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL10A1Q03692 SOX15-203ENST00000570788 1093 ntBASIC16.51■□□□□ 0.23
COL10A1Q03692 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
COL10A1Q03692 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL10A1Q03692 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.51■□□□□ 0.23
COL10A1Q03692 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL10A1Q03692 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL10A1Q03692 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.5■□□□□ 0.23
COL10A1Q03692 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.5■□□□□ 0.23
COL10A1Q03692 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.5■□□□□ 0.23
COL10A1Q03692 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.5■□□□□ 0.23
COL10A1Q03692 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.5■□□□□ 0.23
COL10A1Q03692 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL10A1Q03692 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.5■□□□□ 0.23
COL10A1Q03692 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL10A1Q03692 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL10A1Q03692 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.49■□□□□ 0.23
COL10A1Q03692 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.49■□□□□ 0.23
COL10A1Q03692 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.49■□□□□ 0.23
COL10A1Q03692 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.49■□□□□ 0.23
COL10A1Q03692 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.49■□□□□ 0.23
COL10A1Q03692 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
COL10A1Q03692 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COL10A1Q03692 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COL10A1Q03692 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.49■□□□□ 0.23
COL10A1Q03692 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL10A1Q03692 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 TREX1-205ENST00000625293 1783 ntBASIC16.49■□□□□ 0.23
COL10A1Q03692 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL10A1Q03692 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.48■□□□□ 0.23
COL10A1Q03692 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL10A1Q03692 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.48■□□□□ 0.23
COL10A1Q03692 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COL10A1Q03692 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.48■□□□□ 0.23
COL10A1Q03692 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL10A1Q03692 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COL10A1Q03692 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL10A1Q03692 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.48■□□□□ 0.23
COL10A1Q03692 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms