Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 C14orf2-212ENST00000557260 856 ntTSL 1 (best)7.68□□□□□ -1.183e-6■■■□□ 16.5
SUB1P53999 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC7.63□□□□□ -1.193e-6■■■□□ 16.5
SUB1P53999 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.193e-6■■■□□ 16.5
SUB1P53999 VIRMA-203ENST00000517624 497 ntTSL 37.58□□□□□ -1.23e-6■■■□□ 16.5
SUB1P53999 TECR-214ENST00000598715 541 ntTSL 57.48□□□□□ -1.213e-6■■■□□ 16.5
SUB1P53999 HDAC6-207ENST00000430858 618 ntTSL 37.42□□□□□ -1.227e-9■■■□□ 16.5
SUB1P53999 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.93□□□□□ -1.37e-9■■■□□ 16.5
SUB1P53999 CCDC34-203ENST00000529615 716 ntTSL 36.78□□□□□ -1.323e-6■■■□□ 16.5
SUB1P53999 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.333e-6■■■□□ 16.5
SUB1P53999 VIRMA-205ENST00000521080 6472 ntTSL 1 (best)6.57□□□□□ -1.363e-6■■■□□ 16.5
SUB1P53999 RPS3A-206ENST00000507485 1526 ntTSL 1 (best)6.42□□□□□ -1.387e-9■■■□□ 16.5
SUB1P53999 CHORDC1-209ENST00000533724 5361 ntTSL 26.4□□□□□ -1.393e-6■■■□□ 16.5
SUB1P53999 TECR-208ENST00000596164 245 ntTSL 36.33□□□□□ -1.43e-6■■■□□ 16.5
SUB1P53999 C14orf2-207ENST00000554528 526 ntTSL 25.81□□□□□ -1.483e-6■■■□□ 16.5
SUB1P53999 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.57e-9■■■□□ 16.5
SUB1P53999 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.513e-6■■■□□ 16.5
SUB1P53999 C14orf2-205ENST00000554089 932 ntTSL 1 (best)5.41□□□□□ -1.543e-6■■■□□ 16.5
SUB1P53999 DCTN6-204ENST00000522141 820 ntTSL 35.4□□□□□ -1.543e-6■■■□□ 16.5
SUB1P53999 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.34□□□□□ -1.553e-6■■■□□ 16.5
SUB1P53999 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.16□□□□□ -1.583e-6■■■□□ 16.5
SUB1P53999 VIRMA-207ENST00000522263 3219 ntTSL 1 (best)5.16□□□□□ -1.583e-6■■■□□ 16.5
SUB1P53999 DCTN6-206ENST00000523666 878 ntTSL 55.15□□□□□ -1.593e-6■■■□□ 16.5
SUB1P53999 NUP160-209ENST00000530326 4811 ntAPPRIS ALT2 TSL 55.14□□□□□ -1.593e-6■■■□□ 16.5
SUB1P53999 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.04□□□□□ -1.67e-9■■■□□ 16.5
SUB1P53999 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.92□□□□□ -1.623e-6■■■□□ 16.5
SUB1P53999 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.53□□□□□ -1.683e-6■■■□□ 16.5
SUB1P53999 GNB4-203ENST00000466899 937 ntTSL 1 (best)4.49□□□□□ -1.693e-6■■■□□ 16.5
SUB1P53999 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.713e-6■■■□□ 16.5
SUB1P53999 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.09□□□□□ -1.757e-9■■■□□ 16.5
SUB1P53999 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.763e-6■■■□□ 16.5
SUB1P53999 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.6□□□□□ -1.833e-6■■■□□ 16.5
SUB1P53999 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.883e-6■■■□□ 16.5
SUB1P53999 PHB-208ENST00000507748 582 ntTSL 1 (best)3.28□□□□□ -1.883e-6■■■□□ 16.5
SUB1P53999 PIR-206ENST00000492432 616 ntTSL 23.05□□□□□ -1.923e-6■■■□□ 16.5
SUB1P53999 RPS3A-214ENST00000515818 572 ntTSL 52.93□□□□□ -1.947e-9■■■□□ 16.5
SUB1P53999 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.91□□□□□ -1.947e-9■■■□□ 16.5
SUB1P53999 WRN-203ENST00000521620 3593 ntTSL 1 (best)2.84□□□□□ -1.953e-6■■■□□ 16.5
SUB1P53999 RPS3A-205ENST00000507327 674 ntTSL 22.78□□□□□ -1.967e-9■■■□□ 16.5
SUB1P53999 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.66□□□□□ -1.983e-6■■■□□ 16.5
SUB1P53999 RPS3A-211ENST00000512797 686 ntTSL 22.4□□□□□ -2.037e-9■■■□□ 16.5
SUB1P53999 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.86□□□□□ -2.117e-9■■■□□ 16.5
SUB1P53999 RPS3A-213ENST00000515792 671 ntTSL 31.86□□□□□ -2.117e-9■■■□□ 16.5
SUB1P53999 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.67□□□□□ -2.143e-6■■■□□ 16.5
SUB1P53999 GTF2I-210ENST00000490431 252 ntTSL 31.16□□□□□ -2.223e-6■■■□□ 16.5
SUB1P53999 RPLP0-208ENST00000547191 680 ntTSL 58.16□□□□□ -1.15e-7■■■□□ 16.5
SUB1P53999 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.459e-9■■■□□ 16.5
SUB1P53999 HNRNPU-202ENST00000366525 2851 ntTSL 57.77□□□□□ -1.169e-9■■■□□ 16.5
SUB1P53999 HNRNPU-222ENST00000639880 4239 ntTSL 57.19□□□□□ -1.269e-9■■■□□ 16.5
SUB1P53999 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC6.26□□□□□ -1.412e-8■■■□□ 16.5
SUB1P53999 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.572e-8■■■□□ 16.5
SUB1P53999 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.46□□□□□ -0.741e-6■■■□□ 16.4
SUB1P53999 HSPG2-202ENST00000374676 411 ntTSL 38.8□□□□□ -17e-7■■■□□ 16.4
SUB1P53999 UQCRC2-203ENST00000561798 699 ntTSL 25.45□□□□□ -1.542e-13■■■□□ 16.4
SUB1P53999 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.774e-8■■■□□ 16.4
SUB1P53999 RPS7-205ENST00000462576 907 ntTSL 1 (best)19.21■□□□□ 0.671e-8■■■□□ 16.3
SUB1P53999 RPS7-209ENST00000491937 987 ntTSL 219.21■□□□□ 0.671e-8■■■□□ 16.3
SUB1P53999 RPS7-208ENST00000481006 5429 ntTSL 1 (best)14.63□□□□□ -0.071e-8■■■□□ 16.3
SUB1P53999 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.741e-8■■■□□ 16.3
SUB1P53999 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.061e-8■■■□□ 16.3
SUB1P53999 RPS7-204ENST00000407445 833 ntTSL 2 BASIC6.83□□□□□ -1.321e-8■■■□□ 16.3
SUB1P53999 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.521e-8■■■□□ 16.3
SUB1P53999 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.079e-16■■■□□ 16.3
SUB1P53999 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.168e-7■■■□□ 16.3
SUB1P53999 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.627e-7■■■□□ 16.3
SUB1P53999 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.437e-7■■■□□ 16.3
SUB1P53999 ITM2C-210ENST00000620962 501 ntBASIC14.54□□□□□ -0.087e-7■■■□□ 16.3
SUB1P53999 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.4□□□□□ -0.267e-7■■■□□ 16.3
SUB1P53999 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.37□□□□□ -0.277e-7■■■□□ 16.3
SUB1P53999 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.995e-11■■■□□ 16.3
SUB1P53999 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.572e-7■■■□□ 16.3
SUB1P53999 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.662e-7■■■□□ 16.3
SUB1P53999 SPG11-217ENST00000559511 2127 ntAPPRIS ALT2 TSL 28.87□□□□□ -0.992e-7■■■□□ 16.3
SUB1P53999 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.336e-7■■■□□ 16.3
SUB1P53999 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC10.25□□□□□ -0.776e-7■■■□□ 16.3
SUB1P53999 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC9.72□□□□□ -0.856e-7■■■□□ 16.3
SUB1P53999 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.486e-7■■■□□ 16.3
SUB1P53999 TFG-206ENST00000481203 3271 ntTSL 22.71□□□□□ -1.986e-7■■■□□ 16.3
SUB1P53999 PRMT1-204ENST00000525616 780 ntTSL 215.39■□□□□ 0.052e-6■■■□□ 16.3
SUB1P53999 PRMT1-220ENST00000534676 915 ntTSL 213.95□□□□□ -0.182e-6■■■□□ 16.3
SUB1P53999 PRMT1-218ENST00000534280 766 ntTSL 313.38□□□□□ -0.272e-6■■■□□ 16.3
SUB1P53999 PRMT1-203ENST00000524771 713 ntTSL 312.28□□□□□ -0.442e-6■■■□□ 16.3
SUB1P53999 PRMT1-207ENST00000527382 699 ntTSL 39.93□□□□□ -0.822e-6■■■□□ 16.3
SUB1P53999 PRMT1-219ENST00000534465 779 ntTSL 39.93□□□□□ -0.822e-6■■■□□ 16.3
SUB1P53999 PRMT1-212ENST00000529284 1182 ntTSL 58.78□□□□□ -12e-6■■■□□ 16.3
SUB1P53999 TRIM28-203ENST00000593582 533 ntTSL 311.47□□□□□ -0.577e-7■■■□□ 16.3
SUB1P53999 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.53□□□□□ -0.568e-16■■■□□ 16.3
SUB1P53999 GAS5-214ENST00000436656 822 ntTSL 37.1□□□□□ -1.278e-16■■■□□ 16.3
SUB1P53999 GAS5-210ENST00000431268 1698 ntTSL 26.66□□□□□ -1.348e-16■■■□□ 16.3
SUB1P53999 GAS5-219ENST00000449289 542 ntTSL 3 BASIC6.31□□□□□ -1.48e-16■■■□□ 16.3
SUB1P53999 GAS5-220ENST00000449589 712 ntTSL 36.31□□□□□ -1.48e-16■■■□□ 16.3
SUB1P53999 GAS5-201ENST00000412059 979 ntTSL 54.06□□□□□ -1.768e-16■■■□□ 16.3
SUB1P53999 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.26□□□□□ -1.898e-16■■■□□ 16.3
SUB1P53999 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.01□□□□□ -2.098e-16■■■□□ 16.3
SUB1P53999 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.122e-9■■■□□ 16.3
SUB1P53999 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.972e-9■■■□□ 16.3
SUB1P53999 SRSF1-203ENST00000581497 438 ntTSL 35.79□□□□□ -1.484e-12■■■□□ 16.3
SUB1P53999 G3BP1-212ENST00000522761 1763 ntTSL 213.47□□□□□ -0.252e-6■■■□□ 16.3
SUB1P53999 ATP5L-208ENST00000534385 623 ntTSL 26.32□□□□□ -1.45e-11■■■□□ 16.2
SUB1P53999 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.081e-7■■■□□ 16.2
SUB1P53999 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.081e-7■■■□□ 16.2
Retrieved 100 of 11,644 protein–RNA pairs in 179.7 ms