RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 AEBP2Q6ZN18 517 aaPredicted RBP31.25■■■□□ 2.59
SRSF1-203ENST00000581497 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
SRSF1-203ENST00000581497 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
SRSF1-203ENST00000581497 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
SRSF1-203ENST00000581497 FOXD1Q16676 465 aa24.91■■□□□ 1.58
SRSF1-203ENST00000581497 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
SRSF1-203ENST00000581497 MSH5O43196 834 aa23.41■■□□□ 1.34
SRSF1-203ENST00000581497 PIAS4Q8N2W9 510 aaPredicted RBP23.23■■□□□ 1.31
SRSF1-203ENST00000581497 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
SRSF1-203ENST00000581497 PPP6R1Q9UPN7 881 aa23.11■■□□□ 1.29
SRSF1-203ENST00000581497 ADRA2BP18089 450 aa23.02■■□□□ 1.28
SRSF1-203ENST00000581497 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
SRSF1-203ENST00000581497 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
SRSF1-203ENST00000581497 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
SRSF1-203ENST00000581497 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
SRSF1-203ENST00000581497 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
SRSF1-203ENST00000581497 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
SRSF1-203ENST00000581497 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
SRSF1-203ENST00000581497 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
SRSF1-203ENST00000581497 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
SRSF1-203ENST00000581497 RNF39Q9H2S5 420 aa19.94■□□□□ 0.78
SRSF1-203ENST00000581497 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
SRSF1-203ENST00000581497 C1QBPQ07021 282 aaKnown RBP19.65■□□□□ 0.74
SRSF1-203ENST00000581497 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
SRSF1-203ENST00000581497 NPM3O75607 178 aaKnown RBP19.38■□□□□ 0.69
SRSF1-203ENST00000581497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.688e-40■□□□□ 8.8
SRSF1-203ENST00000581497 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
SRSF1-203ENST00000581497 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
SRSF1-203ENST00000581497 KCNA4P22459 653 aa18.8■□□□□ 0.6
SRSF1-203ENST00000581497 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SRSF1-203ENST00000581497 CAPN15O75808 1086 aa18.67■□□□□ 0.58
SRSF1-203ENST00000581497 DSG3P32926 999 aa18.61■□□□□ 0.57
SRSF1-203ENST00000581497 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
SRSF1-203ENST00000581497 APLP2Q06481 763 aa18.36■□□□□ 0.53
SRSF1-203ENST00000581497 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
SRSF1-203ENST00000581497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-203ENST00000581497 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
SRSF1-203ENST00000581497 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-203ENST00000581497 ABCB7O75027 752 aa18.21■□□□□ 0.51
SRSF1-203ENST00000581497 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-203ENST00000581497 POTEHQ6S545 545 aa18.16■□□□□ 0.5
SRSF1-203ENST00000581497 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-203ENST00000581497 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
SRSF1-203ENST00000581497 POLA2Q14181 598 aa17.76■□□□□ 0.43
SRSF1-203ENST00000581497 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
SRSF1-203ENST00000581497 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
SRSF1-203ENST00000581497 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
SRSF1-203ENST00000581497 CHRDL2Q6WN34 429 aa17.46■□□□□ 0.39
SRSF1-203ENST00000581497 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
SRSF1-203ENST00000581497 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
SRSF1-203ENST00000581497 ZBTB22O15209 634 aa17.27■□□□□ 0.36
SRSF1-203ENST00000581497 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
SRSF1-203ENST00000581497 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
SRSF1-203ENST00000581497 ABCC9O60706 1549 aa17.16■□□□□ 0.34
SRSF1-203ENST00000581497 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-203ENST00000581497 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
SRSF1-203ENST00000581497 PIP4P2Q8N4L2 257 aa16.99■□□□□ 0.31
SRSF1-203ENST00000581497 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
SRSF1-203ENST00000581497 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
SRSF1-203ENST00000581497 FBLN2P98095 1184 aa16.89■□□□□ 0.29
SRSF1-203ENST00000581497 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
SRSF1-203ENST00000581497 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
SRSF1-203ENST00000581497 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
SRSF1-203ENST00000581497 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
SRSF1-203ENST00000581497 HAX1O00165 279 aa16.76■□□□□ 0.27
SRSF1-203ENST00000581497 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-203ENST00000581497 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-203ENST00000581497 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-203ENST00000581497 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
SRSF1-203ENST00000581497 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
SRSF1-203ENST00000581497 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
SRSF1-203ENST00000581497 EVX2Q03828 476 aa16.51■□□□□ 0.23
SRSF1-203ENST00000581497 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
SRSF1-203ENST00000581497 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRSF1-203ENST00000581497 C19orf67A6NJJ6 358 aa16.33■□□□□ 0.2
SRSF1-203ENST00000581497 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
SRSF1-203ENST00000581497 NACADO15069 1562 aa16.3■□□□□ 0.2
SRSF1-203ENST00000581497 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
SRSF1-203ENST00000581497 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
SRSF1-203ENST00000581497 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
SRSF1-203ENST00000581497 GABBR2O75899 941 aa16.14■□□□□ 0.17
SRSF1-203ENST00000581497 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
SRSF1-203ENST00000581497 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-203ENST00000581497 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
SRSF1-203ENST00000581497 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
SRSF1-203ENST00000581497 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
SRSF1-203ENST00000581497 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SRSF1-203ENST00000581497 LHX8Q68G74 356 aa15.87■□□□□ 0.13
SRSF1-203ENST00000581497 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
SRSF1-203ENST00000581497 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
SRSF1-203ENST00000581497 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
SRSF1-203ENST00000581497 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
SRSF1-203ENST00000581497 CLCN6P51797 869 aa15.82■□□□□ 0.12
SRSF1-203ENST00000581497 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
SRSF1-203ENST00000581497 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
SRSF1-203ENST00000581497 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
SRSF1-203ENST00000581497 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
SRSF1-203ENST00000581497 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
SRSF1-203ENST00000581497 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
SRSF1-203ENST00000581497 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms