RNA–Protein interactions for RNA: ENST00000522263.5

VIRMA-207, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 1 (best)

Gene VIRMA, Length 3,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-207ENST00000522263 NISCHQ9Y2I1 1504 aa12.31□□□□□ -0.44
VIRMA-207ENST00000522263 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
VIRMA-207ENST00000522263 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
VIRMA-207ENST00000522263 PPARGC1BQ86YN6 1023 aaKnown RBP10.94□□□□□ -0.66
VIRMA-207ENST00000522263 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
VIRMA-207ENST00000522263 HRCP23327 699 aa10.89□□□□□ -0.67
VIRMA-207ENST00000522263 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
VIRMA-207ENST00000522263 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
VIRMA-207ENST00000522263 CHIC1Q5VXU3 224 aa10.78□□□□□ -0.68
VIRMA-207ENST00000522263 LOC105371045A0A1W2PR82 267 aa10.71□□□□□ -0.7
VIRMA-207ENST00000522263 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
VIRMA-207ENST00000522263 FAM9AQ8IZU1 332 aaPredicted RBP10.44□□□□□ -0.74
VIRMA-207ENST00000522263 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
VIRMA-207ENST00000522263 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
VIRMA-207ENST00000522263 SCAF1Q9H7N4 1312 aaKnown RBP10.33□□□□□ -0.76
VIRMA-207ENST00000522263 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
VIRMA-207ENST00000522263 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
VIRMA-207ENST00000522263 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
VIRMA-207ENST00000522263 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
VIRMA-207ENST00000522263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.18□□□□□ -0.78
VIRMA-207ENST00000522263 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
VIRMA-207ENST00000522263 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
VIRMA-207ENST00000522263 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
VIRMA-207ENST00000522263 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
VIRMA-207ENST00000522263 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
VIRMA-207ENST00000522263 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
VIRMA-207ENST00000522263 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
VIRMA-207ENST00000522263 DIEXFQ68CQ4 756 aaKnown RBP9.99□□□□□ -0.81
VIRMA-207ENST00000522263 RSF1Q96T23 1441 aaPredicted RBP9.97□□□□□ -0.81
VIRMA-207ENST00000522263 RB1CC1Q8TDY2 1594 aa9.91□□□□□ -0.82
VIRMA-207ENST00000522263 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
VIRMA-207ENST00000522263 SCRIBQ14160 1630 aa9.9□□□□□ -0.83
VIRMA-207ENST00000522263 ABCC9O60706 1549 aa9.83□□□□□ -0.84
VIRMA-207ENST00000522263 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
VIRMA-207ENST00000522263 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
VIRMA-207ENST00000522263 CECR2Q9BXF3 1484 aa9.81□□□□□ -0.84
VIRMA-207ENST00000522263 MIER1Q8N108 512 aa9.8□□□□□ -0.84
VIRMA-207ENST00000522263 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
VIRMA-207ENST00000522263 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
VIRMA-207ENST00000522263 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
VIRMA-207ENST00000522263 SOGA1O94964 1423 aa9.66□□□□□ -0.86
VIRMA-207ENST00000522263 CEP162Q5TB80 1403 aa9.66□□□□□ -0.86
VIRMA-207ENST00000522263 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.86
VIRMA-207ENST00000522263 ABCC8Q09428 1581 aa9.65□□□□□ -0.86
VIRMA-207ENST00000522263 WIZO95785 1651 aa9.65□□□□□ -0.86
VIRMA-207ENST00000522263 RUSC2Q8N2Y8 1516 aa9.63□□□□□ -0.87
VIRMA-207ENST00000522263 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
VIRMA-207ENST00000522263 MYT1Q01538 1121 aa9.6□□□□□ -0.87
VIRMA-207ENST00000522263 BCANQ96GW7 911 aa9.58□□□□□ -0.88
VIRMA-207ENST00000522263 APLP2Q06481 763 aa9.56□□□□□ -0.88
VIRMA-207ENST00000522263 NACADO15069 1562 aa9.54□□□□□ -0.88
VIRMA-207ENST00000522263 ITGAEP38570 1179 aa9.54□□□□□ -0.88
VIRMA-207ENST00000522263 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
VIRMA-207ENST00000522263 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
VIRMA-207ENST00000522263 TNIKQ9UKE5 1360 aa9.53□□□□□ -0.88
VIRMA-207ENST00000522263 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
VIRMA-207ENST00000522263 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
VIRMA-207ENST00000522263 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.89
VIRMA-207ENST00000522263 HIRIP3Q9BW71 556 aaPredicted RBP9.43□□□□□ -0.9
VIRMA-207ENST00000522263 CLIP1P30622 1438 aa9.43□□□□□ -0.9
VIRMA-207ENST00000522263 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
VIRMA-207ENST00000522263 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
VIRMA-207ENST00000522263 GOLGA3Q08378 1498 aa9.41□□□□□ -0.9
VIRMA-207ENST00000522263 EIF4G1Q04637 1599 aaKnown RBP9.4□□□□□ -0.9
VIRMA-207ENST00000522263 FKBP8Q14318 412 aa9.39□□□□□ -0.91
VIRMA-207ENST00000522263 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
VIRMA-207ENST00000522263 ANP32EQ9BTT0 268 aa9.37□□□□□ -0.91
VIRMA-207ENST00000522263 DHX57Q6P158 1386 aaKnown RBP9.36□□□□□ -0.91
VIRMA-207ENST00000522263 SMARCA2P51531 1590 aa9.36□□□□□ -0.91
VIRMA-207ENST00000522263 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
VIRMA-207ENST00000522263 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
VIRMA-207ENST00000522263 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
VIRMA-207ENST00000522263 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.92
VIRMA-207ENST00000522263 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
VIRMA-207ENST00000522263 BCL11AQ9H165 835 aa9.32□□□□□ -0.92
VIRMA-207ENST00000522263 ATP1B4Q9UN42 357 aaPredicted RBP9.31□□□□□ -0.92
VIRMA-207ENST00000522263 EEA1Q15075 1411 aa9.31□□□□□ -0.92
VIRMA-207ENST00000522263 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
VIRMA-207ENST00000522263 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
VIRMA-207ENST00000522263 IRX6P78412 446 aaPredicted RBP9.3□□□□□ -0.92
VIRMA-207ENST00000522263 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
VIRMA-207ENST00000522263 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
VIRMA-207ENST00000522263 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
VIRMA-207ENST00000522263 FAM50AQ14320 339 aaKnown RBP9.26□□□□□ -0.93
VIRMA-207ENST00000522263 P3H3Q8IVL6 736 aa9.26□□□□□ -0.93
VIRMA-207ENST00000522263 KIF21BO75037 1637 aa9.25□□□□□ -0.93
VIRMA-207ENST00000522263 NEFLP07196 543 aa9.24□□□□□ -0.93
VIRMA-207ENST00000522263 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.94
VIRMA-207ENST00000522263 RAB3GAP2Q9H2M9 1393 aa9.2□□□□□ -0.94
VIRMA-207ENST00000522263 CNGB1Q14028 1251 aaPredicted RBP9.2□□□□□ -0.94
VIRMA-207ENST00000522263 MSH5O43196 834 aa9.19□□□□□ -0.94
VIRMA-207ENST00000522263 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
VIRMA-207ENST00000522263 ARAP1Q96P48 1450 aa9.18□□□□□ -0.94
VIRMA-207ENST00000522263 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
VIRMA-207ENST00000522263 SENP3-EIF4A1A0A087X0R7 540 aa9.17□□□□□ -0.94
VIRMA-207ENST00000522263 ANP32CO43423 234 aa9.16□□□□□ -0.94
VIRMA-207ENST00000522263 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
VIRMA-207ENST00000522263 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
VIRMA-207ENST00000522263 ERICH6Q7L0X2 663 aa9.12□□□□□ -0.95
VIRMA-207ENST00000522263 WDR97A6NE52 1622 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms