RNA–Protein interactions for RNA: ENST00000529987.5

CHORDC1-206, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 3 BASIC

Gene CHORDC1, Length 1,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-206ENST00000529987 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
CHORDC1-206ENST00000529987 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
CHORDC1-206ENST00000529987 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
CHORDC1-206ENST00000529987 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
CHORDC1-206ENST00000529987 FOXD1Q16676 465 aa20.38■□□□□ 0.85
CHORDC1-206ENST00000529987 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
CHORDC1-206ENST00000529987 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
CHORDC1-206ENST00000529987 MSH5O43196 834 aa19.06■□□□□ 0.64
CHORDC1-206ENST00000529987 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
CHORDC1-206ENST00000529987 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
CHORDC1-206ENST00000529987 ADRA2BP18089 450 aa18.91■□□□□ 0.62
CHORDC1-206ENST00000529987 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
CHORDC1-206ENST00000529987 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
CHORDC1-206ENST00000529987 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
CHORDC1-206ENST00000529987 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
CHORDC1-206ENST00000529987 HOXD11P31277 338 aaPredicted RBP16.63■□□□□ 0.25
CHORDC1-206ENST00000529987 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
CHORDC1-206ENST00000529987 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
CHORDC1-206ENST00000529987 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
CHORDC1-206ENST00000529987 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
CHORDC1-206ENST00000529987 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
CHORDC1-206ENST00000529987 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
CHORDC1-206ENST00000529987 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
CHORDC1-206ENST00000529987 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.15
CHORDC1-206ENST00000529987 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
CHORDC1-206ENST00000529987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHORDC1-206ENST00000529987 KCNA4P22459 653 aa15.6■□□□□ 0.09
CHORDC1-206ENST00000529987 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
CHORDC1-206ENST00000529987 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
CHORDC1-206ENST00000529987 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
CHORDC1-206ENST00000529987 CAPN15O75808 1086 aa15.25■□□□□ 0.03
CHORDC1-206ENST00000529987 DSG3P32926 999 aa15.22■□□□□ 0.03
CHORDC1-206ENST00000529987 POTEHQ6S545 545 aa15.1■□□□□ 0.01
CHORDC1-206ENST00000529987 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
CHORDC1-206ENST00000529987 APLP2Q06481 763 aa14.99□□□□□ -0.01
CHORDC1-206ENST00000529987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
CHORDC1-206ENST00000529987 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
CHORDC1-206ENST00000529987 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
CHORDC1-206ENST00000529987 ABCB7O75027 752 aa14.91□□□□□ -0.02
CHORDC1-206ENST00000529987 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
CHORDC1-206ENST00000529987 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
CHORDC1-206ENST00000529987 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
CHORDC1-206ENST00000529987 POLA2Q14181 598 aa14.58□□□□□ -0.08
CHORDC1-206ENST00000529987 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
CHORDC1-206ENST00000529987 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
CHORDC1-206ENST00000529987 ATF5Q9Y2D1 282 aaPredicted RBP14.48□□□□□ -0.09
CHORDC1-206ENST00000529987 ZBTB22O15209 634 aa14.36□□□□□ -0.11
CHORDC1-206ENST00000529987 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
CHORDC1-206ENST00000529987 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
CHORDC1-206ENST00000529987 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
CHORDC1-206ENST00000529987 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
CHORDC1-206ENST00000529987 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
CHORDC1-206ENST00000529987 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
CHORDC1-206ENST00000529987 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
CHORDC1-206ENST00000529987 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
CHORDC1-206ENST00000529987 FBLN2P98095 1184 aa13.85□□□□□ -0.19
CHORDC1-206ENST00000529987 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
CHORDC1-206ENST00000529987 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
CHORDC1-206ENST00000529987 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
CHORDC1-206ENST00000529987 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
CHORDC1-206ENST00000529987 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
CHORDC1-206ENST00000529987 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHORDC1-206ENST00000529987 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
CHORDC1-206ENST00000529987 HAX1O00165 279 aa13.63□□□□□ -0.23
CHORDC1-206ENST00000529987 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
CHORDC1-206ENST00000529987 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
CHORDC1-206ENST00000529987 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
CHORDC1-206ENST00000529987 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CHORDC1-206ENST00000529987 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
CHORDC1-206ENST00000529987 EVX2Q03828 476 aa13.51□□□□□ -0.25
CHORDC1-206ENST00000529987 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHORDC1-206ENST00000529987 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CHORDC1-206ENST00000529987 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
CHORDC1-206ENST00000529987 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
CHORDC1-206ENST00000529987 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
CHORDC1-206ENST00000529987 GABBR2O75899 941 aa13.18□□□□□ -0.3
CHORDC1-206ENST00000529987 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
CHORDC1-206ENST00000529987 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
CHORDC1-206ENST00000529987 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
CHORDC1-206ENST00000529987 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
CHORDC1-206ENST00000529987 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
CHORDC1-206ENST00000529987 LHX8Q68G74 356 aa12.94□□□□□ -0.34
CHORDC1-206ENST00000529987 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
CHORDC1-206ENST00000529987 CLCN6P51797 869 aa12.89□□□□□ -0.35
CHORDC1-206ENST00000529987 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
CHORDC1-206ENST00000529987 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
CHORDC1-206ENST00000529987 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
CHORDC1-206ENST00000529987 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.36
CHORDC1-206ENST00000529987 PROM2Q8N271 834 aa12.76□□□□□ -0.37
CHORDC1-206ENST00000529987 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
CHORDC1-206ENST00000529987 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
CHORDC1-206ENST00000529987 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHORDC1-206ENST00000529987 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
CHORDC1-206ENST00000529987 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
CHORDC1-206ENST00000529987 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
CHORDC1-206ENST00000529987 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.4
CHORDC1-206ENST00000529987 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.4
CHORDC1-206ENST00000529987 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
CHORDC1-206ENST00000529987 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
CHORDC1-206ENST00000529987 MIER1Q8N108 512 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms