RNA–Protein interactions for RNA: ENST00000533724.5

CHORDC1-209, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 2

Gene CHORDC1, Length 5,361 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-209ENST00000533724 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
CHORDC1-209ENST00000533724 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
CHORDC1-209ENST00000533724 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
CHORDC1-209ENST00000533724 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
CHORDC1-209ENST00000533724 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
CHORDC1-209ENST00000533724 ABCC9O60706 1549 aa12.89□□□□□ -0.35
CHORDC1-209ENST00000533724 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
CHORDC1-209ENST00000533724 NACADO15069 1562 aa12.82□□□□□ -0.36
CHORDC1-209ENST00000533724 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
CHORDC1-209ENST00000533724 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
CHORDC1-209ENST00000533724 SUPT5HO00267 1087 aaKnown RBP12.64□□□□□ -0.39
CHORDC1-209ENST00000533724 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
CHORDC1-209ENST00000533724 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHORDC1-209ENST00000533724 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
CHORDC1-209ENST00000533724 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
CHORDC1-209ENST00000533724 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
CHORDC1-209ENST00000533724 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
CHORDC1-209ENST00000533724 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
CHORDC1-209ENST00000533724 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
CHORDC1-209ENST00000533724 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
CHORDC1-209ENST00000533724 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
CHORDC1-209ENST00000533724 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
CHORDC1-209ENST00000533724 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
CHORDC1-209ENST00000533724 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
CHORDC1-209ENST00000533724 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
CHORDC1-209ENST00000533724 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
CHORDC1-209ENST00000533724 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.53
CHORDC1-209ENST00000533724 APLP2Q06481 763 aa11.73□□□□□ -0.53
CHORDC1-209ENST00000533724 WIZO95785 1651 aa11.73□□□□□ -0.53
CHORDC1-209ENST00000533724 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
CHORDC1-209ENST00000533724 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
CHORDC1-209ENST00000533724 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
CHORDC1-209ENST00000533724 EEA1Q15075 1411 aa11.71□□□□□ -0.53
CHORDC1-209ENST00000533724 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
CHORDC1-209ENST00000533724 CCDC88BA6NC98 1476 aa11.68□□□□□ -0.54
CHORDC1-209ENST00000533724 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
CHORDC1-209ENST00000533724 WRNQ14191 1432 aaPredicted RBP eCLIP11.61□□□□□ -0.55
CHORDC1-209ENST00000533724 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
CHORDC1-209ENST00000533724 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
CHORDC1-209ENST00000533724 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
CHORDC1-209ENST00000533724 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
CHORDC1-209ENST00000533724 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.56
CHORDC1-209ENST00000533724 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
CHORDC1-209ENST00000533724 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
CHORDC1-209ENST00000533724 CFTRP13569 1480 aa11.44□□□□□ -0.58
CHORDC1-209ENST00000533724 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
CHORDC1-209ENST00000533724 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
CHORDC1-209ENST00000533724 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
CHORDC1-209ENST00000533724 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
CHORDC1-209ENST00000533724 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
CHORDC1-209ENST00000533724 TNIKQ9UKE5 1360 aa11.33□□□□□ -0.6
CHORDC1-209ENST00000533724 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
CHORDC1-209ENST00000533724 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
CHORDC1-209ENST00000533724 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
CHORDC1-209ENST00000533724 CUX2O14529 1486 aa11.29□□□□□ -0.6
CHORDC1-209ENST00000533724 TOP2BQ02880 1626 aa11.28□□□□□ -0.6
CHORDC1-209ENST00000533724 SOGA1O94964 1423 aa11.28□□□□□ -0.6
CHORDC1-209ENST00000533724 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.6
CHORDC1-209ENST00000533724 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
CHORDC1-209ENST00000533724 DNMBPQ6XZF7 1577 aa11.25□□□□□ -0.61
CHORDC1-209ENST00000533724 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
CHORDC1-209ENST00000533724 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
CHORDC1-209ENST00000533724 CLIP1P30622 1438 aa11.23□□□□□ -0.61
CHORDC1-209ENST00000533724 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
CHORDC1-209ENST00000533724 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
CHORDC1-209ENST00000533724 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
CHORDC1-209ENST00000533724 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
CHORDC1-209ENST00000533724 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
CHORDC1-209ENST00000533724 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
CHORDC1-209ENST00000533724 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
CHORDC1-209ENST00000533724 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
CHORDC1-209ENST00000533724 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
CHORDC1-209ENST00000533724 KIF21BO75037 1637 aa11.18□□□□□ -0.62
CHORDC1-209ENST00000533724 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
CHORDC1-209ENST00000533724 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
CHORDC1-209ENST00000533724 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
CHORDC1-209ENST00000533724 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
CHORDC1-209ENST00000533724 CUX1P39880 1505 aa11.15□□□□□ -0.62
CHORDC1-209ENST00000533724 FBLN2P98095 1184 aa11.14□□□□□ -0.63
CHORDC1-209ENST00000533724 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
CHORDC1-209ENST00000533724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
CHORDC1-209ENST00000533724 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
CHORDC1-209ENST00000533724 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
CHORDC1-209ENST00000533724 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
CHORDC1-209ENST00000533724 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
CHORDC1-209ENST00000533724 CUL7Q14999 1698 aa11.08□□□□□ -0.64
CHORDC1-209ENST00000533724 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
CHORDC1-209ENST00000533724 NESP48681 1621 aa11.08□□□□□ -0.64
CHORDC1-209ENST00000533724 POLA1P09884 1462 aaPredicted RBP11.07□□□□□ -0.64
CHORDC1-209ENST00000533724 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
CHORDC1-209ENST00000533724 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
CHORDC1-209ENST00000533724 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
CHORDC1-209ENST00000533724 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
CHORDC1-209ENST00000533724 IGF1RP08069 1367 aa11.04□□□□□ -0.64
CHORDC1-209ENST00000533724 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
CHORDC1-209ENST00000533724 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
CHORDC1-209ENST00000533724 PRXQ9BXM0 1461 aa11.02□□□□□ -0.65
CHORDC1-209ENST00000533724 EFCAB5A4FU69 1503 aa11.01□□□□□ -0.65
CHORDC1-209ENST00000533724 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
CHORDC1-209ENST00000533724 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms