Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.78■□□□□ 0.92
SSR1P43307 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSR1P43307 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SSR1P43307 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR1P43307 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSR1P43307 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.78■□□□□ 0.92
SSR1P43307 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SSR1P43307 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR1P43307 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
SSR1P43307 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SSR1P43307 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR1P43307 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SSR1P43307 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.77■□□□□ 0.92
SSR1P43307 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR1P43307 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR1P43307 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR1P43307 AC083906.2-201ENST00000511578 360 ntBASIC20.77■□□□□ 0.92
SSR1P43307 AC023632.3-201ENST00000521633 145 ntBASIC20.77■□□□□ 0.92
SSR1P43307 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR1P43307 RAP2CP1-201ENST00000605103 478 ntBASIC20.77■□□□□ 0.92
SSR1P43307 AL121832.2-201ENST00000610979 668 ntBASIC20.77■□□□□ 0.92
SSR1P43307 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.77■□□□□ 0.92
SSR1P43307 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR1P43307 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR1P43307 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR1P43307 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
SSR1P43307 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SSR1P43307 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.76■□□□□ 0.91
SSR1P43307 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 AC009237.14-201ENST00000609975 1594 ntBASIC20.76■□□□□ 0.91
SSR1P43307 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SSR1P43307 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.76■□□□□ 0.91
SSR1P43307 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 GPX1P1-201ENST00000388829 606 ntBASIC20.76■□□□□ 0.91
SSR1P43307 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SSR1P43307 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.76■□□□□ 0.91
SSR1P43307 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
SSR1P43307 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.76■□□□□ 0.91
SSR1P43307 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.76■□□□□ 0.91
SSR1P43307 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR1P43307 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.75■□□□□ 0.91
SSR1P43307 PHGDH-210ENST00000641115 1638 ntBASIC20.75■□□□□ 0.91
SSR1P43307 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SSR1P43307 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.75■□□□□ 0.91
SSR1P43307 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.75■□□□□ 0.91
SSR1P43307 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.75■□□□□ 0.91
SSR1P43307 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.75■□□□□ 0.91
SSR1P43307 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.75■□□□□ 0.91
SSR1P43307 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.75■□□□□ 0.91
SSR1P43307 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSR1P43307 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR1P43307 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SSR1P43307 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.74■□□□□ 0.91
SSR1P43307 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 MIPEPP3-201ENST00000412105 444 ntBASIC20.74■□□□□ 0.91
SSR1P43307 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.74■□□□□ 0.91
SSR1P43307 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms