Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHRNA3P32297 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRNA3P32297 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRNA3P32297 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRNA3P32297 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRNA3P32297 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.61■□□□□ 0.89
CHRNA3P32297 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CHRNA3P32297 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.61■□□□□ 0.89
CHRNA3P32297 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 HLA-B-256ENST00000639848 1089 ntBASIC20.61■□□□□ 0.89
CHRNA3P32297 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.61■□□□□ 0.89
CHRNA3P32297 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHRNA3P32297 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHRNA3P32297 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 KRT16P6-202ENST00000425692 1426 ntBASIC20.61■□□□□ 0.89
CHRNA3P32297 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNA3P32297 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.61■□□□□ 0.89
CHRNA3P32297 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNA3P32297 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHRNA3P32297 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNA3P32297 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 UNC93B5-201ENST00000530315 699 ntBASIC20.6■□□□□ 0.89
CHRNA3P32297 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
CHRNA3P32297 C2orf69P4-201ENST00000565394 541 ntBASIC20.6■□□□□ 0.89
CHRNA3P32297 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 AC060766.5-201ENST00000590539 871 ntBASIC20.6■□□□□ 0.89
CHRNA3P32297 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.6■□□□□ 0.89
CHRNA3P32297 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNA3P32297 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.6■□□□□ 0.89
CHRNA3P32297 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHRNA3P32297 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA3P32297 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 AP001271.2-201ENST00000624018 1556 ntBASIC20.59■□□□□ 0.89
CHRNA3P32297 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNA3P32297 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 ESRRAP1-201ENST00000400596 1257 ntBASIC20.59■□□□□ 0.89
CHRNA3P32297 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA3P32297 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms