Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 POU5F1P3-201ENST00000428824 1078 ntBASIC18.28■□□□□ 0.52
CHMP24386 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
CHMP24386 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP24386 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP24386 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP24386 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP24386 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP24386 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP24386 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.28■□□□□ 0.52
CHMP24386 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP24386 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP24386 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP24386 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMP24386 AC092368.3-202ENST00000574180 1591 ntBASIC18.27■□□□□ 0.52
CHMP24386 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP24386 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP24386 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP24386 PNMA6B-201ENST00000538162 1200 ntBASIC18.27■□□□□ 0.52
CHMP24386 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMP24386 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHMP24386 MIR4651-201ENST00000582622 73 ntBASIC18.27■□□□□ 0.52
CHMP24386 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP24386 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP24386 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP24386 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.27■□□□□ 0.51
CHMP24386 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP24386 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP24386 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP24386 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP24386 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP24386 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP24386 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHMP24386 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP24386 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP24386 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP24386 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP24386 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP24386 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP24386 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP24386 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP24386 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP24386 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CHMP24386 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHMP24386 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP24386 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP24386 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP24386 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP24386 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms