Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC073488.2-201ENST00000631903 751 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC138915.3-201ENST00000562908 1389 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC114786.1-201ENST00000512892 1415 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 OR2A20P-201ENST00000479887 2913 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 RNU6-621P-201ENST00000364752 109 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 Y_RNA.311-201ENST00000365068 96 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MIR187-201ENST00000385062 109 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 TRAV35-201ENST00000390462 330 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 RPS24P12-201ENST00000402084 394 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC092647.1-201ENST00000420654 287 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CHCHD3P1-201ENST00000425516 676 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MTCO1P3-201ENST00000429327 192 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ZNF37BP-203ENST00000452306 1352 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC079594.1-201ENST00000489757 331 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 RN7SL143P-201ENST00000496780 297 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 snoU109.5-201ENST00000516231 132 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 RNU6-964P-201ENST00000516524 69 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 Y_RNA.693-201ENST00000516641 110 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 RN7SKP116-201ENST00000516902 319 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 OR5AP1P-201ENST00000529730 940 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC005363.1-201ENST00000530779 351 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CCDC150P1-201ENST00000537123 2215 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MIR3149-201ENST00000584629 83 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CUX2P1-201ENST00000606426 298 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC024560.3-201ENST00000608482 349 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AL355974.3-201ENST00000617383 467 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC069209.1-201ENST00000619282 651 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 MIR6823-201ENST00000622118 61 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AC018688.1-201ENST00000636528 1754 ntBASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HPS5Q9UPZ3 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 HDAC1P1-201ENST00000455482 1445 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms