RNA–Protein interactions for RNA: ENST00000233735.1

REG1A-201, Transcript of regenerating family member 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REG1A, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG1A-201ENST00000233735 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
REG1A-201ENST00000233735 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
REG1A-201ENST00000233735 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
REG1A-201ENST00000233735 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
REG1A-201ENST00000233735 FOXD1Q16676 465 aa18■□□□□ 0.47
REG1A-201ENST00000233735 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
REG1A-201ENST00000233735 MSH5O43196 834 aa17.1■□□□□ 0.33
REG1A-201ENST00000233735 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
REG1A-201ENST00000233735 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
REG1A-201ENST00000233735 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
REG1A-201ENST00000233735 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
REG1A-201ENST00000233735 ADRA2BP18089 450 aa16.45■□□□□ 0.22
REG1A-201ENST00000233735 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
REG1A-201ENST00000233735 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
REG1A-201ENST00000233735 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
REG1A-201ENST00000233735 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
REG1A-201ENST00000233735 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
REG1A-201ENST00000233735 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
REG1A-201ENST00000233735 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
REG1A-201ENST00000233735 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
REG1A-201ENST00000233735 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
REG1A-201ENST00000233735 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
REG1A-201ENST00000233735 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
REG1A-201ENST00000233735 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
REG1A-201ENST00000233735 ABCC9O60706 1549 aa14.32□□□□□ -0.12
REG1A-201ENST00000233735 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
REG1A-201ENST00000233735 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
REG1A-201ENST00000233735 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
REG1A-201ENST00000233735 NACADO15069 1562 aa13.9□□□□□ -0.18
REG1A-201ENST00000233735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
REG1A-201ENST00000233735 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
REG1A-201ENST00000233735 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
REG1A-201ENST00000233735 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
REG1A-201ENST00000233735 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
REG1A-201ENST00000233735 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
REG1A-201ENST00000233735 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
REG1A-201ENST00000233735 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
REG1A-201ENST00000233735 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
REG1A-201ENST00000233735 DSG3P32926 999 aa13.45□□□□□ -0.26
REG1A-201ENST00000233735 CAPN15O75808 1086 aa13.44□□□□□ -0.26
REG1A-201ENST00000233735 POTEHQ6S545 545 aa13.41□□□□□ -0.26
REG1A-201ENST00000233735 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
REG1A-201ENST00000233735 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
REG1A-201ENST00000233735 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
REG1A-201ENST00000233735 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
REG1A-201ENST00000233735 APLP2Q06481 763 aa13.28□□□□□ -0.28
REG1A-201ENST00000233735 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
REG1A-201ENST00000233735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
REG1A-201ENST00000233735 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
REG1A-201ENST00000233735 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
REG1A-201ENST00000233735 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
REG1A-201ENST00000233735 KCNA4P22459 653 aa13.1□□□□□ -0.31
REG1A-201ENST00000233735 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
REG1A-201ENST00000233735 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
REG1A-201ENST00000233735 ABCB7O75027 752 aa13.02□□□□□ -0.33
REG1A-201ENST00000233735 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
REG1A-201ENST00000233735 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
REG1A-201ENST00000233735 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
REG1A-201ENST00000233735 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
REG1A-201ENST00000233735 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
REG1A-201ENST00000233735 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
REG1A-201ENST00000233735 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
REG1A-201ENST00000233735 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
REG1A-201ENST00000233735 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
REG1A-201ENST00000233735 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
REG1A-201ENST00000233735 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
REG1A-201ENST00000233735 POLA2Q14181 598 aa12.72□□□□□ -0.37
REG1A-201ENST00000233735 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
REG1A-201ENST00000233735 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
REG1A-201ENST00000233735 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
REG1A-201ENST00000233735 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
REG1A-201ENST00000233735 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
REG1A-201ENST00000233735 WIZO95785 1651 aa12.51□□□□□ -0.41
REG1A-201ENST00000233735 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
REG1A-201ENST00000233735 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
REG1A-201ENST00000233735 ERCC6Q03468 1493 aa12.46□□□□□ -0.42
REG1A-201ENST00000233735 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
REG1A-201ENST00000233735 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
REG1A-201ENST00000233735 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
REG1A-201ENST00000233735 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
REG1A-201ENST00000233735 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
REG1A-201ENST00000233735 CUX2O14529 1486 aa12.38□□□□□ -0.43
REG1A-201ENST00000233735 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
REG1A-201ENST00000233735 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
REG1A-201ENST00000233735 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
REG1A-201ENST00000233735 NESP48681 1621 aa12.33□□□□□ -0.43
REG1A-201ENST00000233735 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
REG1A-201ENST00000233735 CFTRP13569 1480 aa12.3□□□□□ -0.44
REG1A-201ENST00000233735 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
REG1A-201ENST00000233735 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
REG1A-201ENST00000233735 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
REG1A-201ENST00000233735 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
REG1A-201ENST00000233735 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
REG1A-201ENST00000233735 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
REG1A-201ENST00000233735 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
REG1A-201ENST00000233735 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
REG1A-201ENST00000233735 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
REG1A-201ENST00000233735 HAX1O00165 279 aa12.2□□□□□ -0.46
REG1A-201ENST00000233735 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
REG1A-201ENST00000233735 WDR62O43379 1518 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms