RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 NISCHQ9Y2I1 1504 aa13.97□□□□□ -0.17
CACNA1D-201ENST00000288139 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
CACNA1D-201ENST00000288139 MYT1Q01538 1121 aa13.66□□□□□ -0.22
CACNA1D-201ENST00000288139 ZEB1P37275 1124 aaPredicted RBP13.17□□□□□ -0.3
CACNA1D-201ENST00000288139 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
CACNA1D-201ENST00000288139 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
CACNA1D-201ENST00000288139 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
CACNA1D-201ENST00000288139 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-201ENST00000288139 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
CACNA1D-201ENST00000288139 YTHDC1Q96MU7 727 aaKnown RBP12.79□□□□□ -0.36
CACNA1D-201ENST00000288139 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
CACNA1D-201ENST00000288139 TTBK1Q5TCY1 1321 aaPredicted RBP12.67□□□□□ -0.38
CACNA1D-201ENST00000288139 APLP2Q06481 763 aa12.64□□□□□ -0.39
CACNA1D-201ENST00000288139 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
CACNA1D-201ENST00000288139 HRCP23327 699 aa12.44□□□□□ -0.42
CACNA1D-201ENST00000288139 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
CACNA1D-201ENST00000288139 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
CACNA1D-201ENST00000288139 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
CACNA1D-201ENST00000288139 NEFLP07196 543 aa12.36□□□□□ -0.43
CACNA1D-201ENST00000288139 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
CACNA1D-201ENST00000288139 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
CACNA1D-201ENST00000288139 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
CACNA1D-201ENST00000288139 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
CACNA1D-201ENST00000288139 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
CACNA1D-201ENST00000288139 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
CACNA1D-201ENST00000288139 CHIC1Q5VXU3 224 aa11.94□□□□□ -0.5
CACNA1D-201ENST00000288139 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
CACNA1D-201ENST00000288139 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
CACNA1D-201ENST00000288139 RTL5Q5HYW3 569 aaPredicted RBP11.86□□□□□ -0.51
CACNA1D-201ENST00000288139 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
CACNA1D-201ENST00000288139 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
CACNA1D-201ENST00000288139 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
CACNA1D-201ENST00000288139 ACIN1Q9UKV3 1341 aaKnown RBP11.8□□□□□ -0.52
CACNA1D-201ENST00000288139 NEFMP07197 916 aa11.78□□□□□ -0.52
CACNA1D-201ENST00000288139 ZCCHC6Q5VYS8 1495 aaKnown RBP11.74□□□□□ -0.53
CACNA1D-201ENST00000288139 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
CACNA1D-201ENST00000288139 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.54
CACNA1D-201ENST00000288139 CDK11AQ9UQ88 783 aaPredicted RBP11.71□□□□□ -0.54
CACNA1D-201ENST00000288139 EEA1Q15075 1411 aa11.67□□□□□ -0.54
CACNA1D-201ENST00000288139 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
CACNA1D-201ENST00000288139 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
CACNA1D-201ENST00000288139 POLR3GLQ9BT43 218 aa11.55□□□□□ -0.56
CACNA1D-201ENST00000288139 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
CACNA1D-201ENST00000288139 SLC24A1O60721 1099 aa11.52□□□□□ -0.56
CACNA1D-201ENST00000288139 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
CACNA1D-201ENST00000288139 ANP32CO43423 234 aa11.5□□□□□ -0.57
CACNA1D-201ENST00000288139 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
CACNA1D-201ENST00000288139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
CACNA1D-201ENST00000288139 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
CACNA1D-201ENST00000288139 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
CACNA1D-201ENST00000288139 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
CACNA1D-201ENST00000288139 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
CACNA1D-201ENST00000288139 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
CACNA1D-201ENST00000288139 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
CACNA1D-201ENST00000288139 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
CACNA1D-201ENST00000288139 CANXP27824 592 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-201ENST00000288139 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-201ENST00000288139 NACADO15069 1562 aa11.31□□□□□ -0.6
CACNA1D-201ENST00000288139 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
CACNA1D-201ENST00000288139 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
CACNA1D-201ENST00000288139 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.6
CACNA1D-201ENST00000288139 BCANQ96GW7 911 aa11.27□□□□□ -0.61
CACNA1D-201ENST00000288139 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
CACNA1D-201ENST00000288139 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
CACNA1D-201ENST00000288139 ABCC9O60706 1549 aa11.25□□□□□ -0.61
CACNA1D-201ENST00000288139 NEUROD1Q13562 356 aa11.24□□□□□ -0.61
CACNA1D-201ENST00000288139 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
CACNA1D-201ENST00000288139 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
CACNA1D-201ENST00000288139 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.61
CACNA1D-201ENST00000288139 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
CACNA1D-201ENST00000288139 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
CACNA1D-201ENST00000288139 CLIP1P30622 1438 aa11.18□□□□□ -0.62
CACNA1D-201ENST00000288139 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
CACNA1D-201ENST00000288139 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
CACNA1D-201ENST00000288139 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
CACNA1D-201ENST00000288139 TNIKQ9UKE5 1360 aa11.18□□□□□ -0.62
CACNA1D-201ENST00000288139 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
CACNA1D-201ENST00000288139 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.16□□□□□ -0.62
CACNA1D-201ENST00000288139 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.63
CACNA1D-201ENST00000288139 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-201ENST00000288139 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
CACNA1D-201ENST00000288139 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
CACNA1D-201ENST00000288139 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
CACNA1D-201ENST00000288139 RSF1Q96T23 1441 aaPredicted RBP11.13□□□□□ -0.63
CACNA1D-201ENST00000288139 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-201ENST00000288139 CEP162Q5TB80 1403 aa11.11□□□□□ -0.63
CACNA1D-201ENST00000288139 BECN1Q14457 450 aa11.1□□□□□ -0.63
CACNA1D-201ENST00000288139 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
CACNA1D-201ENST00000288139 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
CACNA1D-201ENST00000288139 ZRSR1Q15695 479 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-201ENST00000288139 FAM50AQ14320 339 aaKnown RBP11.07□□□□□ -0.64
CACNA1D-201ENST00000288139 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
CACNA1D-201ENST00000288139 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
CACNA1D-201ENST00000288139 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
CACNA1D-201ENST00000288139 ITGAEP38570 1179 aa11.05□□□□□ -0.64
CACNA1D-201ENST00000288139 KAT6BQ8WYB5 2073 aa11.05□□□□□ -0.64
CACNA1D-201ENST00000288139 CCDC136Q96JN2 1154 aa11.03□□□□□ -0.64
CACNA1D-201ENST00000288139 FKBP8Q14318 412 aa11.02□□□□□ -0.64
CACNA1D-201ENST00000288139 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
CACNA1D-201ENST00000288139 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms