RNA–Protein interactions for RNA: ENST00000542946.1

TMEM138-209, Transcript of transmembrane protein 138, humanhuman

TSL 1 (best) BASIC

Gene TMEM138, Length 2,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-209ENST00000542946 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
TMEM138-209ENST00000542946 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.06
TMEM138-209ENST00000542946 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
TMEM138-209ENST00000542946 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
TMEM138-209ENST00000542946 PHF23Q9BUL5 403 aaPredicted RBP13.86□□□□□ -0.19
TMEM138-209ENST00000542946 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
TMEM138-209ENST00000542946 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
TMEM138-209ENST00000542946 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
TMEM138-209ENST00000542946 ABCC9O60706 1549 aa13.46□□□□□ -0.25
TMEM138-209ENST00000542946 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
TMEM138-209ENST00000542946 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
TMEM138-209ENST00000542946 NACADO15069 1562 aa13.23□□□□□ -0.29
TMEM138-209ENST00000542946 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
TMEM138-209ENST00000542946 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
TMEM138-209ENST00000542946 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
TMEM138-209ENST00000542946 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
TMEM138-209ENST00000542946 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
TMEM138-209ENST00000542946 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
TMEM138-209ENST00000542946 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMEM138-209ENST00000542946 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
TMEM138-209ENST00000542946 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
TMEM138-209ENST00000542946 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
TMEM138-209ENST00000542946 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
TMEM138-209ENST00000542946 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
TMEM138-209ENST00000542946 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
TMEM138-209ENST00000542946 WIZO95785 1651 aa12.52□□□□□ -0.41
TMEM138-209ENST00000542946 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.41
TMEM138-209ENST00000542946 KCNA4P22459 653 aa12.46□□□□□ -0.41
TMEM138-209ENST00000542946 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
TMEM138-209ENST00000542946 ADRA2BP18089 450 aa12.38□□□□□ -0.43
TMEM138-209ENST00000542946 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
TMEM138-209ENST00000542946 SMARCA2P51531 1590 aa12.33□□□□□ -0.43
TMEM138-209ENST00000542946 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
TMEM138-209ENST00000542946 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
TMEM138-209ENST00000542946 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
TMEM138-209ENST00000542946 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
TMEM138-209ENST00000542946 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
TMEM138-209ENST00000542946 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
TMEM138-209ENST00000542946 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
TMEM138-209ENST00000542946 CC2D2AQ9P2K1 1620 aa12.14□□□□□ -0.47
TMEM138-209ENST00000542946 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
TMEM138-209ENST00000542946 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
TMEM138-209ENST00000542946 EEA1Q15075 1411 aa12.04□□□□□ -0.48
TMEM138-209ENST00000542946 ABCC8Q09428 1581 aa12.02□□□□□ -0.48
TMEM138-209ENST00000542946 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
TMEM138-209ENST00000542946 WRNQ14191 1432 aaPredicted RBP eCLIP11.98□□□□□ -0.49
TMEM138-209ENST00000542946 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
TMEM138-209ENST00000542946 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
TMEM138-209ENST00000542946 CFTRP13569 1480 aa11.95□□□□□ -0.5
TMEM138-209ENST00000542946 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
TMEM138-209ENST00000542946 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
TMEM138-209ENST00000542946 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
TMEM138-209ENST00000542946 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
TMEM138-209ENST00000542946 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
TMEM138-209ENST00000542946 KIF21BO75037 1637 aa11.86□□□□□ -0.51
TMEM138-209ENST00000542946 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
TMEM138-209ENST00000542946 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
TMEM138-209ENST00000542946 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
TMEM138-209ENST00000542946 SOGA1O94964 1423 aa11.81□□□□□ -0.52
TMEM138-209ENST00000542946 NESP48681 1621 aa11.8□□□□□ -0.52
TMEM138-209ENST00000542946 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
TMEM138-209ENST00000542946 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
TMEM138-209ENST00000542946 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
TMEM138-209ENST00000542946 CUX1P39880 1505 aa11.78□□□□□ -0.52
TMEM138-209ENST00000542946 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
TMEM138-209ENST00000542946 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
TMEM138-209ENST00000542946 RUSC2Q8N2Y8 1516 aa11.75□□□□□ -0.53
TMEM138-209ENST00000542946 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
TMEM138-209ENST00000542946 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
TMEM138-209ENST00000542946 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
TMEM138-209ENST00000542946 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
TMEM138-209ENST00000542946 DNMBPQ6XZF7 1577 aa11.68□□□□□ -0.54
TMEM138-209ENST00000542946 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
TMEM138-209ENST00000542946 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
TMEM138-209ENST00000542946 UBTFP17480 764 aaKnown RBP11.66□□□□□ -0.54
TMEM138-209ENST00000542946 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
TMEM138-209ENST00000542946 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
TMEM138-209ENST00000542946 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
TMEM138-209ENST00000542946 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
TMEM138-209ENST00000542946 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
TMEM138-209ENST00000542946 CUX2O14529 1486 aa11.61□□□□□ -0.55
TMEM138-209ENST00000542946 FOXD1Q16676 465 aa11.6□□□□□ -0.55
TMEM138-209ENST00000542946 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
TMEM138-209ENST00000542946 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
TMEM138-209ENST00000542946 HRCP23327 699 aa11.59□□□□□ -0.55
TMEM138-209ENST00000542946 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
TMEM138-209ENST00000542946 ZBTB22O15209 634 aa11.58□□□□□ -0.56
TMEM138-209ENST00000542946 CLIP1P30622 1438 aa11.57□□□□□ -0.56
TMEM138-209ENST00000542946 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
TMEM138-209ENST00000542946 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
TMEM138-209ENST00000542946 CUL7Q14999 1698 aa11.56□□□□□ -0.56
TMEM138-209ENST00000542946 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
TMEM138-209ENST00000542946 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
TMEM138-209ENST00000542946 IGF1RP08069 1367 aa11.54□□□□□ -0.56
TMEM138-209ENST00000542946 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
TMEM138-209ENST00000542946 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
TMEM138-209ENST00000542946 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
TMEM138-209ENST00000542946 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
TMEM138-209ENST00000542946 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
TMEM138-209ENST00000542946 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms