RNA–Protein interactions for RNA: ENST00000545622.5

TMEM200A-203, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM200A, Length 2,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-203ENST00000545622 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
TMEM200A-203ENST00000545622 HRCP23327 699 aa12.93□□□□□ -0.34
TMEM200A-203ENST00000545622 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
TMEM200A-203ENST00000545622 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
TMEM200A-203ENST00000545622 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-203ENST00000545622 MYO15BQ96JP2 1530 aa12.53□□□□□ -0.4
TMEM200A-203ENST00000545622 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
TMEM200A-203ENST00000545622 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
TMEM200A-203ENST00000545622 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
TMEM200A-203ENST00000545622 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
TMEM200A-203ENST00000545622 SHROOM4Q9ULL8 1493 aa12.4□□□□□ -0.42
TMEM200A-203ENST00000545622 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
TMEM200A-203ENST00000545622 MYT1Q01538 1121 aa12.34□□□□□ -0.43
TMEM200A-203ENST00000545622 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
TMEM200A-203ENST00000545622 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
TMEM200A-203ENST00000545622 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
TMEM200A-203ENST00000545622 LOC105371045A0A1W2PR82 267 aa11.97□□□□□ -0.49
TMEM200A-203ENST00000545622 ABCC9O60706 1549 aa11.92□□□□□ -0.5
TMEM200A-203ENST00000545622 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
TMEM200A-203ENST00000545622 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
TMEM200A-203ENST00000545622 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.52
TMEM200A-203ENST00000545622 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
TMEM200A-203ENST00000545622 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
TMEM200A-203ENST00000545622 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
TMEM200A-203ENST00000545622 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
TMEM200A-203ENST00000545622 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
TMEM200A-203ENST00000545622 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
TMEM200A-203ENST00000545622 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
TMEM200A-203ENST00000545622 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
TMEM200A-203ENST00000545622 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
TMEM200A-203ENST00000545622 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
TMEM200A-203ENST00000545622 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.56
TMEM200A-203ENST00000545622 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
TMEM200A-203ENST00000545622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
TMEM200A-203ENST00000545622 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
TMEM200A-203ENST00000545622 EEA1Q15075 1411 aa11.41□□□□□ -0.58
TMEM200A-203ENST00000545622 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
TMEM200A-203ENST00000545622 TNIKQ9UKE5 1360 aa11.4□□□□□ -0.58
TMEM200A-203ENST00000545622 FAM9AQ8IZU1 332 aaPredicted RBP11.36□□□□□ -0.59
TMEM200A-203ENST00000545622 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
TMEM200A-203ENST00000545622 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
TMEM200A-203ENST00000545622 NACADO15069 1562 aa11.33□□□□□ -0.6
TMEM200A-203ENST00000545622 WIZO95785 1651 aa11.29□□□□□ -0.6
TMEM200A-203ENST00000545622 MIER1Q8N108 512 aa11.28□□□□□ -0.6
TMEM200A-203ENST00000545622 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.61
TMEM200A-203ENST00000545622 ANP32EQ9BTT0 268 aa11.25□□□□□ -0.61
TMEM200A-203ENST00000545622 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
TMEM200A-203ENST00000545622 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
TMEM200A-203ENST00000545622 KIF21BO75037 1637 aa11.2□□□□□ -0.62
TMEM200A-203ENST00000545622 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
TMEM200A-203ENST00000545622 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
TMEM200A-203ENST00000545622 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
TMEM200A-203ENST00000545622 BAZ1BQ9UIG0 1483 aaKnown RBP11.16□□□□□ -0.62
TMEM200A-203ENST00000545622 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
TMEM200A-203ENST00000545622 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
TMEM200A-203ENST00000545622 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.63
TMEM200A-203ENST00000545622 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
TMEM200A-203ENST00000545622 CEP164Q9UPV0 1460 aa11.13□□□□□ -0.63
TMEM200A-203ENST00000545622 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
TMEM200A-203ENST00000545622 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
TMEM200A-203ENST00000545622 SOGA1O94964 1423 aa11.12□□□□□ -0.63
TMEM200A-203ENST00000545622 CUX2O14529 1486 aa11.1□□□□□ -0.63
TMEM200A-203ENST00000545622 SMARCA4P51532 1647 aa11.08□□□□□ -0.63
TMEM200A-203ENST00000545622 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
TMEM200A-203ENST00000545622 CLIP1P30622 1438 aa11.06□□□□□ -0.64
TMEM200A-203ENST00000545622 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
TMEM200A-203ENST00000545622 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
TMEM200A-203ENST00000545622 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
TMEM200A-203ENST00000545622 RRBP1Q9P2E9 1410 aaKnown RBP10.99□□□□□ -0.65
TMEM200A-203ENST00000545622 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
TMEM200A-203ENST00000545622 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
TMEM200A-203ENST00000545622 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
TMEM200A-203ENST00000545622 HNRNPUL2Q1KMD3 747 aaKnown RBP10.95□□□□□ -0.66
TMEM200A-203ENST00000545622 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
TMEM200A-203ENST00000545622 APLP2Q06481 763 aa10.91□□□□□ -0.66
TMEM200A-203ENST00000545622 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
TMEM200A-203ENST00000545622 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
TMEM200A-203ENST00000545622 CCER2I3L3R5 266 aa10.89□□□□□ -0.67
TMEM200A-203ENST00000545622 RBM19Q9Y4C8 960 aaKnown RBP10.89□□□□□ -0.67
TMEM200A-203ENST00000545622 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
TMEM200A-203ENST00000545622 RAPGEF2Q9Y4G8 1499 aa10.86□□□□□ -0.67
TMEM200A-203ENST00000545622 AEBP2Q6ZN18 517 aaPredicted RBP10.86□□□□□ -0.67
TMEM200A-203ENST00000545622 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
TMEM200A-203ENST00000545622 ARAP1Q96P48 1450 aa10.85□□□□□ -0.67
TMEM200A-203ENST00000545622 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
TMEM200A-203ENST00000545622 TOP2BQ02880 1626 aa10.85□□□□□ -0.67
TMEM200A-203ENST00000545622 BIVM-ERCC5R4GMW8 1640 aa10.85□□□□□ -0.67
TMEM200A-203ENST00000545622 MAPKBP1O60336 1514 aa10.83□□□□□ -0.67
TMEM200A-203ENST00000545622 NEFLP07196 543 aa10.81□□□□□ -0.68
TMEM200A-203ENST00000545622 FKBP8Q14318 412 aa10.81□□□□□ -0.68
TMEM200A-203ENST00000545622 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
TMEM200A-203ENST00000545622 UNC13AQ9UPW8 1703 aa10.8□□□□□ -0.68
TMEM200A-203ENST00000545622 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
TMEM200A-203ENST00000545622 MSH5O43196 834 aa10.75□□□□□ -0.69
TMEM200A-203ENST00000545622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
TMEM200A-203ENST00000545622 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
TMEM200A-203ENST00000545622 WDR97A6NE52 1622 aa10.72□□□□□ -0.69
TMEM200A-203ENST00000545622 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
TMEM200A-203ENST00000545622 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
TMEM200A-203ENST00000545622 KCNH8Q96L42 1107 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms