RNA–Protein interactions for RNA: ENST00000516902.1

RN7SKP116-201, Transcript of RNA, 7SK small nuclear pseudogene 116, humanhuman

BASIC

Gene RN7SKP116, Length 319 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP116-201ENST00000516902 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
RN7SKP116-201ENST00000516902 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
RN7SKP116-201ENST00000516902 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
RN7SKP116-201ENST00000516902 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
RN7SKP116-201ENST00000516902 FOXD1Q16676 465 aa17.38■□□□□ 0.37
RN7SKP116-201ENST00000516902 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
RN7SKP116-201ENST00000516902 MSH5O43196 834 aa16.32■□□□□ 0.2
RN7SKP116-201ENST00000516902 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
RN7SKP116-201ENST00000516902 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
RN7SKP116-201ENST00000516902 ADRA2BP18089 450 aa16.18■□□□□ 0.18
RN7SKP116-201ENST00000516902 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
RN7SKP116-201ENST00000516902 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
RN7SKP116-201ENST00000516902 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
RN7SKP116-201ENST00000516902 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
RN7SKP116-201ENST00000516902 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
RN7SKP116-201ENST00000516902 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
RN7SKP116-201ENST00000516902 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
RN7SKP116-201ENST00000516902 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
RN7SKP116-201ENST00000516902 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
RN7SKP116-201ENST00000516902 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
RN7SKP116-201ENST00000516902 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP116-201ENST00000516902 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
RN7SKP116-201ENST00000516902 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
RN7SKP116-201ENST00000516902 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
RN7SKP116-201ENST00000516902 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
RN7SKP116-201ENST00000516902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.23
RN7SKP116-201ENST00000516902 KCNA4P22459 653 aa13.5□□□□□ -0.25
RN7SKP116-201ENST00000516902 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
RN7SKP116-201ENST00000516902 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
RN7SKP116-201ENST00000516902 CAPN15O75808 1086 aa13.08□□□□□ -0.32
RN7SKP116-201ENST00000516902 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP116-201ENST00000516902 DSG3P32926 999 aa13.02□□□□□ -0.33
RN7SKP116-201ENST00000516902 APLP2Q06481 763 aa13□□□□□ -0.33
RN7SKP116-201ENST00000516902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP116-201ENST00000516902 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
RN7SKP116-201ENST00000516902 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP116-201ENST00000516902 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP116-201ENST00000516902 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP116-201ENST00000516902 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP116-201ENST00000516902 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
RN7SKP116-201ENST00000516902 ABCB7O75027 752 aa12.74□□□□□ -0.37
RN7SKP116-201ENST00000516902 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
RN7SKP116-201ENST00000516902 POLA2Q14181 598 aa12.53□□□□□ -0.4
RN7SKP116-201ENST00000516902 POTEHQ6S545 545 aa12.46□□□□□ -0.41
RN7SKP116-201ENST00000516902 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
RN7SKP116-201ENST00000516902 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP116-201ENST00000516902 ZBTB22O15209 634 aa12.37□□□□□ -0.43
RN7SKP116-201ENST00000516902 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP116-201ENST00000516902 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
RN7SKP116-201ENST00000516902 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
RN7SKP116-201ENST00000516902 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
RN7SKP116-201ENST00000516902 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
RN7SKP116-201ENST00000516902 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
RN7SKP116-201ENST00000516902 FBLN2P98095 1184 aa12□□□□□ -0.49
RN7SKP116-201ENST00000516902 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
RN7SKP116-201ENST00000516902 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
RN7SKP116-201ENST00000516902 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
RN7SKP116-201ENST00000516902 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
RN7SKP116-201ENST00000516902 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP116-201ENST00000516902 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
RN7SKP116-201ENST00000516902 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
RN7SKP116-201ENST00000516902 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
RN7SKP116-201ENST00000516902 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP116-201ENST00000516902 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
RN7SKP116-201ENST00000516902 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP116-201ENST00000516902 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP116-201ENST00000516902 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
RN7SKP116-201ENST00000516902 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
RN7SKP116-201ENST00000516902 HAX1O00165 279 aa11.65□□□□□ -0.54
RN7SKP116-201ENST00000516902 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
RN7SKP116-201ENST00000516902 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
RN7SKP116-201ENST00000516902 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
RN7SKP116-201ENST00000516902 EVX2Q03828 476 aa11.45□□□□□ -0.58
RN7SKP116-201ENST00000516902 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
RN7SKP116-201ENST00000516902 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
RN7SKP116-201ENST00000516902 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
RN7SKP116-201ENST00000516902 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
RN7SKP116-201ENST00000516902 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP116-201ENST00000516902 GABBR2O75899 941 aa11.24□□□□□ -0.61
RN7SKP116-201ENST00000516902 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
RN7SKP116-201ENST00000516902 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
RN7SKP116-201ENST00000516902 CLCN6P51797 869 aa11.17□□□□□ -0.62
RN7SKP116-201ENST00000516902 PROM2Q8N271 834 aa11.07□□□□□ -0.64
RN7SKP116-201ENST00000516902 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
RN7SKP116-201ENST00000516902 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
RN7SKP116-201ENST00000516902 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
RN7SKP116-201ENST00000516902 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
RN7SKP116-201ENST00000516902 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
RN7SKP116-201ENST00000516902 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
RN7SKP116-201ENST00000516902 DCBLD2Q96PD2 775 aa10.96□□□□□ -0.65
RN7SKP116-201ENST00000516902 LHX8Q68G74 356 aa10.95□□□□□ -0.66
RN7SKP116-201ENST00000516902 GALR2O43603 387 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP116-201ENST00000516902 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
RN7SKP116-201ENST00000516902 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
RN7SKP116-201ENST00000516902 MIER1Q8N108 512 aa10.82□□□□□ -0.68
RN7SKP116-201ENST00000516902 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
RN7SKP116-201ENST00000516902 FKBP8Q14318 412 aa10.75□□□□□ -0.69
RN7SKP116-201ENST00000516902 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
RN7SKP116-201ENST00000516902 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
RN7SKP116-201ENST00000516902 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms