RNA–Protein interactions for RNA: ENST00000370687.6

PRIM2-202, Transcript of DNA primase subunit 2, humanhuman

TSL 3 BASIC

Gene PRIM2, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-202ENST00000370687 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
PRIM2-202ENST00000370687 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
PRIM2-202ENST00000370687 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
PRIM2-202ENST00000370687 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
PRIM2-202ENST00000370687 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
PRIM2-202ENST00000370687 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PRIM2-202ENST00000370687 MSH5O43196 834 aa17.94■□□□□ 0.46
PRIM2-202ENST00000370687 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
PRIM2-202ENST00000370687 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
PRIM2-202ENST00000370687 ADRA2BP18089 450 aa16.85■□□□□ 0.29
PRIM2-202ENST00000370687 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
PRIM2-202ENST00000370687 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
PRIM2-202ENST00000370687 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
PRIM2-202ENST00000370687 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
PRIM2-202ENST00000370687 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
PRIM2-202ENST00000370687 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
PRIM2-202ENST00000370687 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
PRIM2-202ENST00000370687 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
PRIM2-202ENST00000370687 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
PRIM2-202ENST00000370687 POTEHQ6S545 545 aa14.6□□□□□ -0.07
PRIM2-202ENST00000370687 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
PRIM2-202ENST00000370687 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
PRIM2-202ENST00000370687 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
PRIM2-202ENST00000370687 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
PRIM2-202ENST00000370687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.134e-7■■■■□ 23.1
PRIM2-202ENST00000370687 DSG3P32926 999 aa13.97□□□□□ -0.17
PRIM2-202ENST00000370687 CAPN15O75808 1086 aa13.88□□□□□ -0.19
PRIM2-202ENST00000370687 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
PRIM2-202ENST00000370687 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
PRIM2-202ENST00000370687 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PRIM2-202ENST00000370687 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
PRIM2-202ENST00000370687 ABCB7O75027 752 aa13.47□□□□□ -0.25
PRIM2-202ENST00000370687 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
PRIM2-202ENST00000370687 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
PRIM2-202ENST00000370687 APLP2Q06481 763 aa13.41□□□□□ -0.26
PRIM2-202ENST00000370687 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
PRIM2-202ENST00000370687 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
PRIM2-202ENST00000370687 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
PRIM2-202ENST00000370687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
PRIM2-202ENST00000370687 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
PRIM2-202ENST00000370687 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
PRIM2-202ENST00000370687 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
PRIM2-202ENST00000370687 KCNA4P22459 653 aa12.96□□□□□ -0.33
PRIM2-202ENST00000370687 POLA2Q14181 598 aa12.91□□□□□ -0.34
PRIM2-202ENST00000370687 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
PRIM2-202ENST00000370687 HAX1O00165 279 aa12.89□□□□□ -0.35
PRIM2-202ENST00000370687 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
PRIM2-202ENST00000370687 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
PRIM2-202ENST00000370687 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRIM2-202ENST00000370687 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
PRIM2-202ENST00000370687 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
PRIM2-202ENST00000370687 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
PRIM2-202ENST00000370687 EVX2Q03828 476 aa12.61□□□□□ -0.39
PRIM2-202ENST00000370687 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
PRIM2-202ENST00000370687 LHX8Q68G74 356 aa12.48□□□□□ -0.41
PRIM2-202ENST00000370687 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
PRIM2-202ENST00000370687 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.44
PRIM2-202ENST00000370687 GABBR2O75899 941 aa12.32□□□□□ -0.44
PRIM2-202ENST00000370687 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
PRIM2-202ENST00000370687 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
PRIM2-202ENST00000370687 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
PRIM2-202ENST00000370687 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
PRIM2-202ENST00000370687 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
PRIM2-202ENST00000370687 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
PRIM2-202ENST00000370687 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
PRIM2-202ENST00000370687 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
PRIM2-202ENST00000370687 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
PRIM2-202ENST00000370687 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
PRIM2-202ENST00000370687 FBLN2P98095 1184 aa11.98□□□□□ -0.49
PRIM2-202ENST00000370687 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
PRIM2-202ENST00000370687 ZBTB22O15209 634 aa11.93□□□□□ -0.5
PRIM2-202ENST00000370687 CLCN6P51797 869 aa11.91□□□□□ -0.5
PRIM2-202ENST00000370687 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
PRIM2-202ENST00000370687 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
PRIM2-202ENST00000370687 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
PRIM2-202ENST00000370687 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
PRIM2-202ENST00000370687 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
PRIM2-202ENST00000370687 POTEMA6NI47 508 aa11.8□□□□□ -0.52
PRIM2-202ENST00000370687 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
PRIM2-202ENST00000370687 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
PRIM2-202ENST00000370687 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
PRIM2-202ENST00000370687 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
PRIM2-202ENST00000370687 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
PRIM2-202ENST00000370687 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
PRIM2-202ENST00000370687 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
PRIM2-202ENST00000370687 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
PRIM2-202ENST00000370687 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRIM2-202ENST00000370687 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
PRIM2-202ENST00000370687 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
PRIM2-202ENST00000370687 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
PRIM2-202ENST00000370687 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
PRIM2-202ENST00000370687 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
PRIM2-202ENST00000370687 MAMSTRQ6ZN01 415 aa11.37□□□□□ -0.59
PRIM2-202ENST00000370687 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
PRIM2-202ENST00000370687 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
PRIM2-202ENST00000370687 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
PRIM2-202ENST00000370687 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
PRIM2-202ENST00000370687 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
PRIM2-202ENST00000370687 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
PRIM2-202ENST00000370687 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms