RNA–Protein interactions for RNA: ENST00000354662.5

LMO3-204, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-204ENST00000354662 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
LMO3-204ENST00000354662 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
LMO3-204ENST00000354662 MYT1Q01538 1121 aa14.68□□□□□ -0.06
LMO3-204ENST00000354662 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
LMO3-204ENST00000354662 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
LMO3-204ENST00000354662 HRCP23327 699 aa14.05□□□□□ -0.16
LMO3-204ENST00000354662 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
LMO3-204ENST00000354662 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
LMO3-204ENST00000354662 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
LMO3-204ENST00000354662 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
LMO3-204ENST00000354662 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
LMO3-204ENST00000354662 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
LMO3-204ENST00000354662 APLP2Q06481 763 aa13.31□□□□□ -0.28
LMO3-204ENST00000354662 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
LMO3-204ENST00000354662 BCL11AQ9H165 835 aa13.29□□□□□ -0.28
LMO3-204ENST00000354662 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
LMO3-204ENST00000354662 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
LMO3-204ENST00000354662 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
LMO3-204ENST00000354662 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
LMO3-204ENST00000354662 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.32
LMO3-204ENST00000354662 NACADO15069 1562 aa13.02□□□□□ -0.33
LMO3-204ENST00000354662 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
LMO3-204ENST00000354662 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
LMO3-204ENST00000354662 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
LMO3-204ENST00000354662 ABCC9O60706 1549 aa12.81□□□□□ -0.36
LMO3-204ENST00000354662 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
LMO3-204ENST00000354662 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
LMO3-204ENST00000354662 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
LMO3-204ENST00000354662 UNC13AQ9UPW8 1703 aa12.69□□□□□ -0.38
LMO3-204ENST00000354662 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
LMO3-204ENST00000354662 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
LMO3-204ENST00000354662 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
LMO3-204ENST00000354662 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.4
LMO3-204ENST00000354662 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
LMO3-204ENST00000354662 CHIC1Q5VXU3 224 aa12.47□□□□□ -0.41
LMO3-204ENST00000354662 UBE2Q2Q8WVN8 375 aa12.44□□□□□ -0.42
LMO3-204ENST00000354662 BICRAQ9NZM4 1560 aa12.44□□□□□ -0.42
LMO3-204ENST00000354662 PEG3Q9GZU2 1588 aa12.42□□□□□ -0.42
LMO3-204ENST00000354662 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
LMO3-204ENST00000354662 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
LMO3-204ENST00000354662 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
LMO3-204ENST00000354662 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
LMO3-204ENST00000354662 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
LMO3-204ENST00000354662 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
LMO3-204ENST00000354662 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
LMO3-204ENST00000354662 TRIM41Q8WV44 630 aa12.27□□□□□ -0.44
LMO3-204ENST00000354662 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.45
LMO3-204ENST00000354662 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
LMO3-204ENST00000354662 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
LMO3-204ENST00000354662 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
LMO3-204ENST00000354662 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
LMO3-204ENST00000354662 WIZO95785 1651 aa12.21□□□□□ -0.46
LMO3-204ENST00000354662 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
LMO3-204ENST00000354662 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
LMO3-204ENST00000354662 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
LMO3-204ENST00000354662 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
LMO3-204ENST00000354662 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
LMO3-204ENST00000354662 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
LMO3-204ENST00000354662 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
LMO3-204ENST00000354662 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
LMO3-204ENST00000354662 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
LMO3-204ENST00000354662 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
LMO3-204ENST00000354662 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
LMO3-204ENST00000354662 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
LMO3-204ENST00000354662 FANCIQ9NVI1 1328 aa11.97□□□□□ -0.49
LMO3-204ENST00000354662 MSH5O43196 834 aa11.97□□□□□ -0.49
LMO3-204ENST00000354662 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
LMO3-204ENST00000354662 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
LMO3-204ENST00000354662 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
LMO3-204ENST00000354662 MIER1Q8N108 512 aa11.94□□□□□ -0.5
LMO3-204ENST00000354662 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
LMO3-204ENST00000354662 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
LMO3-204ENST00000354662 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
LMO3-204ENST00000354662 PODXL2Q9NZ53 605 aa11.9□□□□□ -0.5
LMO3-204ENST00000354662 CCER1Q8TC90 406 aaPredicted RBP11.87□□□□□ -0.51
LMO3-204ENST00000354662 CCDC136Q96JN2 1154 aa11.84□□□□□ -0.51
LMO3-204ENST00000354662 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
LMO3-204ENST00000354662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
LMO3-204ENST00000354662 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
LMO3-204ENST00000354662 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
LMO3-204ENST00000354662 EEA1Q15075 1411 aa11.71□□□□□ -0.53
LMO3-204ENST00000354662 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
LMO3-204ENST00000354662 NEFLP07196 543 aa11.68□□□□□ -0.54
LMO3-204ENST00000354662 CFTRP13569 1480 aa11.67□□□□□ -0.54
LMO3-204ENST00000354662 KIF21BO75037 1637 aa11.66□□□□□ -0.54
LMO3-204ENST00000354662 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
LMO3-204ENST00000354662 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
LMO3-204ENST00000354662 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
LMO3-204ENST00000354662 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
LMO3-204ENST00000354662 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
LMO3-204ENST00000354662 GLIPR1L2Q4G1C9 344 aa11.61□□□□□ -0.55
LMO3-204ENST00000354662 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
LMO3-204ENST00000354662 ZMYND15Q9H091 742 aa11.57□□□□□ -0.56
LMO3-204ENST00000354662 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
LMO3-204ENST00000354662 WRNQ14191 1432 aaPredicted RBP eCLIP11.56□□□□□ -0.56
LMO3-204ENST00000354662 FKBP8Q14318 412 aa11.56□□□□□ -0.56
LMO3-204ENST00000354662 WASHC2AQ641Q2 1341 aa11.55□□□□□ -0.56
LMO3-204ENST00000354662 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
LMO3-204ENST00000354662 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
LMO3-204ENST00000354662 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms