RNA–Protein interactions for RNA: ENST00000618132.1

MALAT1-212, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 725 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-212ENST00000618132 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
MALAT1-212ENST00000618132 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
MALAT1-212ENST00000618132 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
MALAT1-212ENST00000618132 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
MALAT1-212ENST00000618132 FOXD1Q16676 465 aa17.5■□□□□ 0.39
MALAT1-212ENST00000618132 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
MALAT1-212ENST00000618132 MSH5O43196 834 aa16.48■□□□□ 0.23
MALAT1-212ENST00000618132 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
MALAT1-212ENST00000618132 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
MALAT1-212ENST00000618132 ADRA2BP18089 450 aa16.22■□□□□ 0.19
MALAT1-212ENST00000618132 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
MALAT1-212ENST00000618132 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
MALAT1-212ENST00000618132 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
MALAT1-212ENST00000618132 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
MALAT1-212ENST00000618132 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
MALAT1-212ENST00000618132 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
MALAT1-212ENST00000618132 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
MALAT1-212ENST00000618132 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
MALAT1-212ENST00000618132 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
MALAT1-212ENST00000618132 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
MALAT1-212ENST00000618132 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.16
MALAT1-212ENST00000618132 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
MALAT1-212ENST00000618132 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
MALAT1-212ENST00000618132 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
MALAT1-212ENST00000618132 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
MALAT1-212ENST00000618132 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
MALAT1-212ENST00000618132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
MALAT1-212ENST00000618132 KCNA4P22459 653 aa13.42□□□□□ -0.26
MALAT1-212ENST00000618132 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
MALAT1-212ENST00000618132 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
MALAT1-212ENST00000618132 HRCP23327 699 aa13.26□□□□□ -0.29
MALAT1-212ENST00000618132 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
MALAT1-212ENST00000618132 CAPN15O75808 1086 aa13.14□□□□□ -0.31
MALAT1-212ENST00000618132 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
MALAT1-212ENST00000618132 DSG3P32926 999 aa13.09□□□□□ -0.31
MALAT1-212ENST00000618132 APLP2Q06481 763 aa13.06□□□□□ -0.32
MALAT1-212ENST00000618132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
MALAT1-212ENST00000618132 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
MALAT1-212ENST00000618132 MYT1Q01538 1121 aa12.97□□□□□ -0.33
MALAT1-212ENST00000618132 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
MALAT1-212ENST00000618132 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
MALAT1-212ENST00000618132 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
MALAT1-212ENST00000618132 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
MALAT1-212ENST00000618132 ABCB7O75027 752 aa12.8□□□□□ -0.36
MALAT1-212ENST00000618132 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
MALAT1-212ENST00000618132 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
MALAT1-212ENST00000618132 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
MALAT1-212ENST00000618132 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
MALAT1-212ENST00000618132 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
MALAT1-212ENST00000618132 POTEHQ6S545 545 aa12.64□□□□□ -0.39
MALAT1-212ENST00000618132 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
MALAT1-212ENST00000618132 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
MALAT1-212ENST00000618132 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
MALAT1-212ENST00000618132 POLA2Q14181 598 aa12.55□□□□□ -0.4
MALAT1-212ENST00000618132 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
MALAT1-212ENST00000618132 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
MALAT1-212ENST00000618132 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
MALAT1-212ENST00000618132 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
MALAT1-212ENST00000618132 ZBTB22O15209 634 aa12.32□□□□□ -0.44
MALAT1-212ENST00000618132 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
MALAT1-212ENST00000618132 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
MALAT1-212ENST00000618132 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
MALAT1-212ENST00000618132 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
MALAT1-212ENST00000618132 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
MALAT1-212ENST00000618132 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
MALAT1-212ENST00000618132 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.46
MALAT1-212ENST00000618132 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
MALAT1-212ENST00000618132 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
MALAT1-212ENST00000618132 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
MALAT1-212ENST00000618132 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
MALAT1-212ENST00000618132 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
MALAT1-212ENST00000618132 CENPBP07199 599 aaPredicted RBP12.02□□□□□ -0.49
MALAT1-212ENST00000618132 FBLN2P98095 1184 aa12.01□□□□□ -0.49
MALAT1-212ENST00000618132 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
MALAT1-212ENST00000618132 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
MALAT1-212ENST00000618132 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
MALAT1-212ENST00000618132 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
MALAT1-212ENST00000618132 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
MALAT1-212ENST00000618132 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
MALAT1-212ENST00000618132 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
MALAT1-212ENST00000618132 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
MALAT1-212ENST00000618132 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
MALAT1-212ENST00000618132 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
MALAT1-212ENST00000618132 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
MALAT1-212ENST00000618132 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
MALAT1-212ENST00000618132 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
MALAT1-212ENST00000618132 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
MALAT1-212ENST00000618132 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
MALAT1-212ENST00000618132 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
MALAT1-212ENST00000618132 HAX1O00165 279 aa11.74□□□□□ -0.53
MALAT1-212ENST00000618132 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
MALAT1-212ENST00000618132 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
MALAT1-212ENST00000618132 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
MALAT1-212ENST00000618132 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
MALAT1-212ENST00000618132 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
MALAT1-212ENST00000618132 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
MALAT1-212ENST00000618132 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
MALAT1-212ENST00000618132 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
MALAT1-212ENST00000618132 ABCC9O60706 1549 aa11.57□□□□□ -0.56
MALAT1-212ENST00000618132 TSHZ2Q9NRE2 1034 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms