RNA–Protein interactions for RNA: ENST00000535986.1

SMCO2-203, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SMCO2, Length 1,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-203ENST00000535986 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
SMCO2-203ENST00000535986 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
SMCO2-203ENST00000535986 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
SMCO2-203ENST00000535986 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
SMCO2-203ENST00000535986 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
SMCO2-203ENST00000535986 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
SMCO2-203ENST00000535986 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SMCO2-203ENST00000535986 ABCC9O60706 1549 aa15.37■□□□□ 0.05
SMCO2-203ENST00000535986 FOXD1Q16676 465 aa15.18■□□□□ 0.02
SMCO2-203ENST00000535986 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
SMCO2-203ENST00000535986 NACADO15069 1562 aa14.92□□□□□ -0.02
SMCO2-203ENST00000535986 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
SMCO2-203ENST00000535986 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
SMCO2-203ENST00000535986 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
SMCO2-203ENST00000535986 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
SMCO2-203ENST00000535986 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
SMCO2-203ENST00000535986 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
SMCO2-203ENST00000535986 ADRA2BP18089 450 aa14.62□□□□□ -0.07
SMCO2-203ENST00000535986 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
SMCO2-203ENST00000535986 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
SMCO2-203ENST00000535986 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.09
SMCO2-203ENST00000535986 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMCO2-203ENST00000535986 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
SMCO2-203ENST00000535986 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
SMCO2-203ENST00000535986 MSH5O43196 834 aa14.06□□□□□ -0.16
SMCO2-203ENST00000535986 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
SMCO2-203ENST00000535986 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SMCO2-203ENST00000535986 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
SMCO2-203ENST00000535986 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
SMCO2-203ENST00000535986 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
SMCO2-203ENST00000535986 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
SMCO2-203ENST00000535986 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.2
SMCO2-203ENST00000535986 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
SMCO2-203ENST00000535986 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
SMCO2-203ENST00000535986 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.21
SMCO2-203ENST00000535986 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
SMCO2-203ENST00000535986 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
SMCO2-203ENST00000535986 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.22
SMCO2-203ENST00000535986 WIZO95785 1651 aa13.7□□□□□ -0.22
SMCO2-203ENST00000535986 BAZ1BQ9UIG0 1483 aaKnown RBP13.66□□□□□ -0.22
SMCO2-203ENST00000535986 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
SMCO2-203ENST00000535986 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
SMCO2-203ENST00000535986 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
SMCO2-203ENST00000535986 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
SMCO2-203ENST00000535986 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
SMCO2-203ENST00000535986 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
SMCO2-203ENST00000535986 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
SMCO2-203ENST00000535986 NESP48681 1621 aa13.35□□□□□ -0.27
SMCO2-203ENST00000535986 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
SMCO2-203ENST00000535986 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
SMCO2-203ENST00000535986 CFTRP13569 1480 aa13.3□□□□□ -0.28
SMCO2-203ENST00000535986 KCNA4P22459 653 aa13.26□□□□□ -0.29
SMCO2-203ENST00000535986 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
SMCO2-203ENST00000535986 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
SMCO2-203ENST00000535986 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
SMCO2-203ENST00000535986 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
SMCO2-203ENST00000535986 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
SMCO2-203ENST00000535986 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
SMCO2-203ENST00000535986 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
SMCO2-203ENST00000535986 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
SMCO2-203ENST00000535986 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
SMCO2-203ENST00000535986 CUX2O14529 1486 aa13.13□□□□□ -0.31
SMCO2-203ENST00000535986 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
SMCO2-203ENST00000535986 WDR62O43379 1518 aa13.09□□□□□ -0.31
SMCO2-203ENST00000535986 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
SMCO2-203ENST00000535986 URB2Q14146 1524 aaKnown RBP13.06□□□□□ -0.32
SMCO2-203ENST00000535986 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
SMCO2-203ENST00000535986 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
SMCO2-203ENST00000535986 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
SMCO2-203ENST00000535986 TOPBP1Q92547 1522 aa13□□□□□ -0.33
SMCO2-203ENST00000535986 CUX1P39880 1505 aa12.97□□□□□ -0.33
SMCO2-203ENST00000535986 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
SMCO2-203ENST00000535986 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
SMCO2-203ENST00000535986 SYNJ1O43426 1573 aa12.91□□□□□ -0.34
SMCO2-203ENST00000535986 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
SMCO2-203ENST00000535986 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
SMCO2-203ENST00000535986 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
SMCO2-203ENST00000535986 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
SMCO2-203ENST00000535986 IFT140Q96RY7 1462 aa12.88□□□□□ -0.35
SMCO2-203ENST00000535986 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
SMCO2-203ENST00000535986 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
SMCO2-203ENST00000535986 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
SMCO2-203ENST00000535986 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
SMCO2-203ENST00000535986 SOGA1O94964 1423 aa12.82□□□□□ -0.36
SMCO2-203ENST00000535986 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
SMCO2-203ENST00000535986 EIF4G3O43432 1585 aaKnown RBP12.79□□□□□ -0.36
SMCO2-203ENST00000535986 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
SMCO2-203ENST00000535986 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
SMCO2-203ENST00000535986 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
SMCO2-203ENST00000535986 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMCO2-203ENST00000535986 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
SMCO2-203ENST00000535986 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
SMCO2-203ENST00000535986 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
SMCO2-203ENST00000535986 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
SMCO2-203ENST00000535986 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
SMCO2-203ENST00000535986 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
SMCO2-203ENST00000535986 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
SMCO2-203ENST00000535986 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
SMCO2-203ENST00000535986 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
SMCO2-203ENST00000535986 CHD1O14646 1710 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms