RNA–Protein interactions for RNA: ENST00000465261.6

LMO7-207, Transcript of LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene LMO7, Length 5,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-207ENST00000465261 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
LMO7-207ENST00000465261 NISCHQ9Y2I1 1504 aa14.04□□□□□ -0.16
LMO7-207ENST00000465261 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
LMO7-207ENST00000465261 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
LMO7-207ENST00000465261 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
LMO7-207ENST00000465261 APLP2Q06481 763 aa12.89□□□□□ -0.35
LMO7-207ENST00000465261 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
LMO7-207ENST00000465261 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
LMO7-207ENST00000465261 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
LMO7-207ENST00000465261 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
LMO7-207ENST00000465261 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
LMO7-207ENST00000465261 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
LMO7-207ENST00000465261 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
LMO7-207ENST00000465261 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
LMO7-207ENST00000465261 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
LMO7-207ENST00000465261 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
LMO7-207ENST00000465261 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
LMO7-207ENST00000465261 ABCC9O60706 1549 aa12.17□□□□□ -0.46
LMO7-207ENST00000465261 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
LMO7-207ENST00000465261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
LMO7-207ENST00000465261 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
LMO7-207ENST00000465261 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
LMO7-207ENST00000465261 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
LMO7-207ENST00000465261 TRIM26Q12899 539 aaPredicted RBP12.07□□□□□ -0.48
LMO7-207ENST00000465261 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
LMO7-207ENST00000465261 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
LMO7-207ENST00000465261 ITGAEP38570 1179 aa12.04□□□□□ -0.48
LMO7-207ENST00000465261 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
LMO7-207ENST00000465261 NEFLP07196 543 aa11.95□□□□□ -0.5
LMO7-207ENST00000465261 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
LMO7-207ENST00000465261 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
LMO7-207ENST00000465261 HRCP23327 699 aa11.81□□□□□ -0.52
LMO7-207ENST00000465261 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
LMO7-207ENST00000465261 FBLN2P98095 1184 aa11.73□□□□□ -0.53
LMO7-207ENST00000465261 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
LMO7-207ENST00000465261 TRIM52Q96A61 297 aa11.7□□□□□ -0.54
LMO7-207ENST00000465261 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
LMO7-207ENST00000465261 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
LMO7-207ENST00000465261 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
LMO7-207ENST00000465261 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
LMO7-207ENST00000465261 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
LMO7-207ENST00000465261 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
LMO7-207ENST00000465261 DIEXFQ68CQ4 756 aaKnown RBP11.57□□□□□ -0.56
LMO7-207ENST00000465261 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
LMO7-207ENST00000465261 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
LMO7-207ENST00000465261 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
LMO7-207ENST00000465261 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
LMO7-207ENST00000465261 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
LMO7-207ENST00000465261 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
LMO7-207ENST00000465261 ANP32CO43423 234 aa11.42□□□□□ -0.58
LMO7-207ENST00000465261 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
LMO7-207ENST00000465261 RB1CC1Q8TDY2 1594 aa11.39□□□□□ -0.59
LMO7-207ENST00000465261 BCANQ96GW7 911 aa11.39□□□□□ -0.59
LMO7-207ENST00000465261 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
LMO7-207ENST00000465261 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
LMO7-207ENST00000465261 MYT1Q01538 1121 aa11.32□□□□□ -0.6
LMO7-207ENST00000465261 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
LMO7-207ENST00000465261 NEFMP07197 916 aa11.27□□□□□ -0.6
LMO7-207ENST00000465261 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.6
LMO7-207ENST00000465261 NACADO15069 1562 aa11.27□□□□□ -0.61
LMO7-207ENST00000465261 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
LMO7-207ENST00000465261 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
LMO7-207ENST00000465261 TONSLQ96HA7 1378 aa11.25□□□□□ -0.61
LMO7-207ENST00000465261 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
LMO7-207ENST00000465261 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
LMO7-207ENST00000465261 CANXP27824 592 aaKnown RBP11.23□□□□□ -0.61
LMO7-207ENST00000465261 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
LMO7-207ENST00000465261 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
LMO7-207ENST00000465261 DCAF1Q9Y4B6 1507 aa11.22□□□□□ -0.61
LMO7-207ENST00000465261 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
LMO7-207ENST00000465261 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.62
LMO7-207ENST00000465261 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
LMO7-207ENST00000465261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■□□□ 12.5
LMO7-207ENST00000465261 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
LMO7-207ENST00000465261 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
LMO7-207ENST00000465261 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
LMO7-207ENST00000465261 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
LMO7-207ENST00000465261 CLIP1P30622 1438 aa11.18□□□□□ -0.62
LMO7-207ENST00000465261 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
LMO7-207ENST00000465261 EEA1Q15075 1411 aa11.14□□□□□ -0.63
LMO7-207ENST00000465261 WRNQ14191 1432 aaPredicted RBP eCLIP11.14□□□□□ -0.63
LMO7-207ENST00000465261 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
LMO7-207ENST00000465261 DDX10Q13206 875 aaKnown RBP11.1□□□□□ -0.63
LMO7-207ENST00000465261 KCNH8Q96L42 1107 aa11.09□□□□□ -0.63
LMO7-207ENST00000465261 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
LMO7-207ENST00000465261 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
LMO7-207ENST00000465261 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
LMO7-207ENST00000465261 BAZ1AQ9NRL2 1556 aaPredicted RBP11.07□□□□□ -0.64
LMO7-207ENST00000465261 CEP162Q5TB80 1403 aa11.07□□□□□ -0.64
LMO7-207ENST00000465261 RRP7BPQ9NSQ0 103 aa11.07□□□□□ -0.64
LMO7-207ENST00000465261 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
LMO7-207ENST00000465261 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
LMO7-207ENST00000465261 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
LMO7-207ENST00000465261 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
LMO7-207ENST00000465261 TMC1Q8TDI8 760 aa11.02□□□□□ -0.64
LMO7-207ENST00000465261 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
LMO7-207ENST00000465261 CECR2Q9BXF3 1484 aa11.02□□□□□ -0.65
LMO7-207ENST00000465261 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
LMO7-207ENST00000465261 SALL2Q9Y467 1007 aaPredicted RBP11.01□□□□□ -0.65
LMO7-207ENST00000465261 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms