RNA–Protein interactions for RNA: ENST00000265071.2

CDH6-201, Transcript of cadherin 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH6, Length 8,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-201ENST00000265071 NISCHQ9Y2I1 1504 aa14.47□□□□□ -0.09
CDH6-201ENST00000265071 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
CDH6-201ENST00000265071 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
CDH6-201ENST00000265071 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
CDH6-201ENST00000265071 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
CDH6-201ENST00000265071 HRCP23327 699 aa12.49□□□□□ -0.41
CDH6-201ENST00000265071 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
CDH6-201ENST00000265071 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
CDH6-201ENST00000265071 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
CDH6-201ENST00000265071 CCDC180Q9P1Z9 1646 aa12.24□□□□□ -0.45
CDH6-201ENST00000265071 ZCCHC6Q5VYS8 1495 aaKnown RBP12.2□□□□□ -0.46
CDH6-201ENST00000265071 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
CDH6-201ENST00000265071 PPARGC1BQ86YN6 1023 aaKnown RBP12.14□□□□□ -0.47
CDH6-201ENST00000265071 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
CDH6-201ENST00000265071 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
CDH6-201ENST00000265071 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
CDH6-201ENST00000265071 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
CDH6-201ENST00000265071 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
CDH6-201ENST00000265071 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
CDH6-201ENST00000265071 MYT1Q01538 1121 aa11.96□□□□□ -0.49
CDH6-201ENST00000265071 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
CDH6-201ENST00000265071 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
CDH6-201ENST00000265071 APLP2Q06481 763 aa11.8□□□□□ -0.52
CDH6-201ENST00000265071 TTBK1Q5TCY1 1321 aaPredicted RBP11.73□□□□□ -0.53
CDH6-201ENST00000265071 SCRIBQ14160 1630 aa11.69□□□□□ -0.54
CDH6-201ENST00000265071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
CDH6-201ENST00000265071 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
CDH6-201ENST00000265071 ABCC9O60706 1549 aa11.62□□□□□ -0.55
CDH6-201ENST00000265071 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
CDH6-201ENST00000265071 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
CDH6-201ENST00000265071 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
CDH6-201ENST00000265071 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
CDH6-201ENST00000265071 RB1CC1Q8TDY2 1594 aa11.55□□□□□ -0.56
CDH6-201ENST00000265071 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
CDH6-201ENST00000265071 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
CDH6-201ENST00000265071 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
CDH6-201ENST00000265071 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
CDH6-201ENST00000265071 NEUROD1Q13562 356 aa11.42□□□□□ -0.58
CDH6-201ENST00000265071 NEFLP07196 543 aa11.42□□□□□ -0.58
CDH6-201ENST00000265071 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
CDH6-201ENST00000265071 RANGAP1P46060 587 aaPredicted RBP11.39□□□□□ -0.59
CDH6-201ENST00000265071 NACADO15069 1562 aa11.35□□□□□ -0.59
CDH6-201ENST00000265071 WIZO95785 1651 aa11.28□□□□□ -0.6
CDH6-201ENST00000265071 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
CDH6-201ENST00000265071 CEP162Q5TB80 1403 aa11.27□□□□□ -0.61
CDH6-201ENST00000265071 CLSPNQ9HAW4 1339 aa11.24□□□□□ -0.61
CDH6-201ENST00000265071 EEA1Q15075 1411 aa11.23□□□□□ -0.61
CDH6-201ENST00000265071 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
CDH6-201ENST00000265071 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
CDH6-201ENST00000265071 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
CDH6-201ENST00000265071 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
CDH6-201ENST00000265071 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
CDH6-201ENST00000265071 MIER1Q8N108 512 aa11.17□□□□□ -0.62
CDH6-201ENST00000265071 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
CDH6-201ENST00000265071 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
CDH6-201ENST00000265071 ITGAEP38570 1179 aa11.13□□□□□ -0.63
CDH6-201ENST00000265071 CLIP1P30622 1438 aa11.1□□□□□ -0.63
CDH6-201ENST00000265071 TOP2AP11388 1531 aaKnown RBP11.1□□□□□ -0.63
CDH6-201ENST00000265071 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
CDH6-201ENST00000265071 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
CDH6-201ENST00000265071 CCDC88BA6NC98 1476 aa11.09□□□□□ -0.63
CDH6-201ENST00000265071 SOGA1O94964 1423 aa11.06□□□□□ -0.64
CDH6-201ENST00000265071 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
CDH6-201ENST00000265071 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
CDH6-201ENST00000265071 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH6-201ENST00000265071 BCANQ96GW7 911 aa10.99□□□□□ -0.65
CDH6-201ENST00000265071 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
CDH6-201ENST00000265071 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
CDH6-201ENST00000265071 ANP32CO43423 234 aa10.97□□□□□ -0.65
CDH6-201ENST00000265071 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.65
CDH6-201ENST00000265071 SUPT16HQ9Y5B9 1047 aaKnown RBP10.93□□□□□ -0.66
CDH6-201ENST00000265071 FKBP8Q14318 412 aa10.92□□□□□ -0.66
CDH6-201ENST00000265071 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
CDH6-201ENST00000265071 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
CDH6-201ENST00000265071 KIF21BO75037 1637 aa10.9□□□□□ -0.66
CDH6-201ENST00000265071 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
CDH6-201ENST00000265071 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
CDH6-201ENST00000265071 ANP32EQ9BTT0 268 aa10.87□□□□□ -0.67
CDH6-201ENST00000265071 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
CDH6-201ENST00000265071 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
CDH6-201ENST00000265071 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
CDH6-201ENST00000265071 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
CDH6-201ENST00000265071 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
CDH6-201ENST00000265071 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
CDH6-201ENST00000265071 TONSLQ96HA7 1378 aa10.79□□□□□ -0.68
CDH6-201ENST00000265071 DHX57Q6P158 1386 aaKnown RBP10.78□□□□□ -0.68
CDH6-201ENST00000265071 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
CDH6-201ENST00000265071 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
CDH6-201ENST00000265071 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
CDH6-201ENST00000265071 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH6-201ENST00000265071 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
CDH6-201ENST00000265071 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
CDH6-201ENST00000265071 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
CDH6-201ENST00000265071 SETD5Q9C0A6 1442 aa10.71□□□□□ -0.69
CDH6-201ENST00000265071 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
CDH6-201ENST00000265071 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
CDH6-201ENST00000265071 POLR3GLQ9BT43 218 aa10.69□□□□□ -0.7
CDH6-201ENST00000265071 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
CDH6-201ENST00000265071 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
CDH6-201ENST00000265071 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms