RNA–Protein interactions for RNA: ENST00000521715.5

LINC00293-204, long intergenic non-protein coding RNA 293, humanhuman

TSL 1 (best) BASIC

Gene LINC00293, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-204ENST00000521715 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
LINC00293-204ENST00000521715 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
LINC00293-204ENST00000521715 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
LINC00293-204ENST00000521715 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
LINC00293-204ENST00000521715 FOXD1Q16676 465 aa16.42■□□□□ 0.22
LINC00293-204ENST00000521715 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
LINC00293-204ENST00000521715 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
LINC00293-204ENST00000521715 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
LINC00293-204ENST00000521715 ADRA2BP18089 450 aa15.79■□□□□ 0.12
LINC00293-204ENST00000521715 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
LINC00293-204ENST00000521715 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
LINC00293-204ENST00000521715 MSH5O43196 834 aa15.06■□□□□ 0
LINC00293-204ENST00000521715 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
LINC00293-204ENST00000521715 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
LINC00293-204ENST00000521715 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
LINC00293-204ENST00000521715 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
LINC00293-204ENST00000521715 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
LINC00293-204ENST00000521715 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
LINC00293-204ENST00000521715 KCNA4P22459 653 aa14.17□□□□□ -0.14
LINC00293-204ENST00000521715 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
LINC00293-204ENST00000521715 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
LINC00293-204ENST00000521715 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
LINC00293-204ENST00000521715 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
LINC00293-204ENST00000521715 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
LINC00293-204ENST00000521715 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
LINC00293-204ENST00000521715 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
LINC00293-204ENST00000521715 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
LINC00293-204ENST00000521715 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
LINC00293-204ENST00000521715 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
LINC00293-204ENST00000521715 ARXQ96QS3 562 aa13.52□□□□□ -0.25
LINC00293-204ENST00000521715 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
LINC00293-204ENST00000521715 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
LINC00293-204ENST00000521715 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
LINC00293-204ENST00000521715 BCANQ96GW7 911 aa13.31□□□□□ -0.28
LINC00293-204ENST00000521715 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
LINC00293-204ENST00000521715 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
LINC00293-204ENST00000521715 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
LINC00293-204ENST00000521715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00293-204ENST00000521715 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
LINC00293-204ENST00000521715 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
LINC00293-204ENST00000521715 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
LINC00293-204ENST00000521715 ZBTB22O15209 634 aa13.07□□□□□ -0.32
LINC00293-204ENST00000521715 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
LINC00293-204ENST00000521715 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
LINC00293-204ENST00000521715 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
LINC00293-204ENST00000521715 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.34
LINC00293-204ENST00000521715 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
LINC00293-204ENST00000521715 APLP2Q06481 763 aa12.94□□□□□ -0.34
LINC00293-204ENST00000521715 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
LINC00293-204ENST00000521715 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
LINC00293-204ENST00000521715 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
LINC00293-204ENST00000521715 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
LINC00293-204ENST00000521715 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
LINC00293-204ENST00000521715 MYT1Q01538 1121 aa12.79□□□□□ -0.36
LINC00293-204ENST00000521715 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
LINC00293-204ENST00000521715 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
LINC00293-204ENST00000521715 FKBP8Q14318 412 aa12.73□□□□□ -0.37
LINC00293-204ENST00000521715 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
LINC00293-204ENST00000521715 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
LINC00293-204ENST00000521715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
LINC00293-204ENST00000521715 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
LINC00293-204ENST00000521715 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
LINC00293-204ENST00000521715 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
LINC00293-204ENST00000521715 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
LINC00293-204ENST00000521715 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
LINC00293-204ENST00000521715 CAPN15O75808 1086 aa12.53□□□□□ -0.4
LINC00293-204ENST00000521715 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
LINC00293-204ENST00000521715 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
LINC00293-204ENST00000521715 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
LINC00293-204ENST00000521715 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
LINC00293-204ENST00000521715 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
LINC00293-204ENST00000521715 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
LINC00293-204ENST00000521715 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.43
LINC00293-204ENST00000521715 ABCB7O75027 752 aa12.34□□□□□ -0.43
LINC00293-204ENST00000521715 DSG3P32926 999 aa12.33□□□□□ -0.44
LINC00293-204ENST00000521715 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
LINC00293-204ENST00000521715 FBLN2P98095 1184 aa12.31□□□□□ -0.44
LINC00293-204ENST00000521715 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
LINC00293-204ENST00000521715 POLA2Q14181 598 aa12.27□□□□□ -0.45
LINC00293-204ENST00000521715 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
LINC00293-204ENST00000521715 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
LINC00293-204ENST00000521715 EIF5BO60841 1220 aaKnown RBP12.13□□□□□ -0.47
LINC00293-204ENST00000521715 NBR1Q14596 966 aa12.08□□□□□ -0.47
LINC00293-204ENST00000521715 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
LINC00293-204ENST00000521715 UBTFP17480 764 aaKnown RBP12.02□□□□□ -0.49
LINC00293-204ENST00000521715 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
LINC00293-204ENST00000521715 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
LINC00293-204ENST00000521715 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
LINC00293-204ENST00000521715 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
LINC00293-204ENST00000521715 HRCP23327 699 aa11.96□□□□□ -0.49
LINC00293-204ENST00000521715 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
LINC00293-204ENST00000521715 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
LINC00293-204ENST00000521715 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
LINC00293-204ENST00000521715 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
LINC00293-204ENST00000521715 PKD2Q13563 968 aa11.83□□□□□ -0.52
LINC00293-204ENST00000521715 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00293-204ENST00000521715 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
LINC00293-204ENST00000521715 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
LINC00293-204ENST00000521715 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
LINC00293-204ENST00000521715 CCDC9Q9Y3X0 531 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms